RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ANKEF1Q9NU02 776 aa8.63□□□□□ -1.03
PDLIM5-204ENST00000380176 SEPT11Q9NVA2 429 aaKnown RBP8.63□□□□□ -1.03
PDLIM5-204ENST00000380176 CYP39A1Q9NYL5 469 aa8.63□□□□□ -1.03
PDLIM5-204ENST00000380176 WDR90Q96KV7 1748 aa8.63□□□□□ -1.03
PDLIM5-204ENST00000380176 LTBP3Q9NS15 1303 aa8.63□□□□□ -1.03
PDLIM5-204ENST00000380176 A0A0A6YYK5 440 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 DENND3A2RUS2 1198 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 CEP104O60308 925 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 FDX1P10109 184 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 LMNB1P20700 586 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 CNGA1P29973 690 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 AARSP49588 968 aaKnown RBP eCLIP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 SP2Q02086 613 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 KIF22Q14807 665 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 ZNF746Q6NUN9 644 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 PEX26Q7Z412 305 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 DAAM2Q86T65 1068 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 NT5DC3Q86UY8 548 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 KLHL7Q8IXQ5 586 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 TSEN2Q8NCE0 465 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 FAM71BQ8TC56 605 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 NSUN6Q8TEA1 469 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 SEMA4DQ92854 862 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 CCDC127Q96BQ5 260 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 GPRASP2Q96D09 838 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 CEP170P1Q96L14 293 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 C12orf42Q96LP6 360 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 AP1M1Q9BXS5 423 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 THAP2Q9H0W7 228 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 EPB41L5Q9HCM4 733 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 TOPORSQ9NS56 1045 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 TMEM59LQ9UK28 342 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 INTUQ9ULD6 942 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 USP20Q9Y2K6 914 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 MAP3K13O43283 966 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 RAD51CO43502 376 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 BUB1BO60566 1050 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 RNF40O75150 1001 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 HEXIM1O94992 359 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 FAM153BP0C7A2 387 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 GUCY2DQ02846 1103 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 SNRNP35Q16560 246 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 FAM153CQ494X1 144 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 HSP90B2PQ58FF3 399 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 TAF4BQ92750 862 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 SENP7Q9BQF6 1050 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 KMT5AQ9NQR1 393 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 XPNPEP1Q9NQW7 623 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 GDF3Q9NR23 364 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 CHORDC1Q9UHD1 332 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 FAM153AQ9UHL3 310 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 COG5Q9UP83 839 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 PTPRFP10586 1907 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 SPDYE16A6NNV3 312 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 TNFAIP3P21580 790 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 IFI16Q16666 785 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 MAP4K3Q8IVH8 894 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 IFT81Q8WYA0 676 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 KREMEN1Q96MU8 473 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 AGPAT1Q99943 283 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 NFU1Q9UMS0 254 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 AFG3L2Q9Y4W6 797 aa8.62□□□□□ -1.03
PDLIM5-204ENST00000380176 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 SGPL1O95470 568 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 TMEM253P0C7T8 217 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 LMAN1P49257 510 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 MXI1P50539 228 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 ACTR2P61160 394 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 PPATQ06203 517 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 DMP1Q13316 513 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 GLE1Q53GS7 698 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 APOBEC3FQ8IUX4 373 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 CEP120Q8N960 986 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 PARD3BQ8TEW8 1205 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 SCFD2Q8WU76 684 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 CASKIN2Q8WXE0 1202 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 RFFLQ8WZ73 363 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 EXOC4Q96A65 974 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 HES6Q96HZ4 224 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 TIPINQ9BVW5 301 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 TEX13BQ9BXU2 312 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 FAM204AQ9H8W3 233 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 JPH1Q9HDC5 661 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 MED4Q9NPJ6 270 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 PDLIM7Q9NR12 457 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 GPRC5DQ9NZD1 345 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 SLC9A2Q9UBY0 812 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 NCANO14594 1321 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 ATP8B3O60423 1300 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 CES2O00748 559 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 ITGA4P13612 1032 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 USP8P40818 1118 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 SMTNP53814 917 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 OAZ1P54368 228 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 EPHB4P54760 987 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 PRKCEQ02156 737 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 CNTN2Q02246 1040 aa8.61□□□□□ -1.03
PDLIM5-204ENST00000380176 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms