RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 PDE2AO00408 941 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 CXCL11O14625 94 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 IRF6O14896 467 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 ZNF185O15231 689 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 ZNF862O60290 1169 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 TMEM253P0C7T8 217 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 NF2P35240 595 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 PLA2G4AP47712 749 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 MXI1P50539 228 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 ALDH5A1P51649 535 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 PRKG1Q13976 671 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 TTLL12Q14166 644 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 BRDTQ58F21 947 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 PRRT2Q7Z6L0 340 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 TAF4BQ92750 862 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 PBKQ96KB5 322 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 FAM81BQ96LP2 452 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 FBXL18Q96ME1 805 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 SYT11Q9BT88 431 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 UBXN6Q9BZV1 441 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 KIAA1586Q9HCI6 787 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 ABCB6Q9NP58 842 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 SEPT9Q9UHD8 586 aaPredicted RBP11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 L1RE1Q9UN81 338 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 TRIM17Q9Y577 477 aa11.35□□□□□ -0.59
POLR2J3-201ENST00000379340 LRRC37A2A6NM11 1700 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 TMEM150BA6NC51 233 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 DDX3XO00571 662 aaKnown RBP eCLIP11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 SLC25A27O95847 323 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 TNFAIP3P21580 790 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 EDNRBP24530 442 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 CNGA1P29973 690 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 SNRNP35Q16560 246 aaKnown RBP11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 KRT39Q6A163 491 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 ERO1BQ86YB8 467 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 CCDC60Q8IWA6 550 aaPredicted RBP11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 RDH13Q8NBN7 331 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 SPATA4Q8NEY3 305 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 COG1Q8WTW3 980 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 U2AF1L4Q8WU68 220 aaKnown RBP11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 CFHR5Q9BXR6 569 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 PACSIN1Q9BY11 444 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 GPR88Q9GZN0 384 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 VIPAS39Q9H9C1 493 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 TMEM8AQ9HCN3 771 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 ZNF302Q9NR11 478 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 COQ4Q9Y3A0 265 aa11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 MAFBQ9Y5Q3 323 aaPredicted RBP11.34□□□□□ -0.59
POLR2J3-201ENST00000379340 IGKV6D-21A0A0A0MT36 114 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 NCK2O43639 380 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SASH3O75995 380 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 OATP04181 439 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 TGFB3P10600 412 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 TNFRSF8P28908 595 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 RFC5P40937 340 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 IRX3P78415 501 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 PPP3CAQ08209 521 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 C2orf54Q08AI8 447 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 NEDD9Q14511 834 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 EMC2Q15006 297 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 RPS6KA1Q15418 735 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 C1orf220Q5T0J3 134 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 TREML2Q5T2D2 321 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 FAM160B1Q5W0V3 765 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 KCNV1Q6PIU1 500 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SLFN11Q7Z7L1 901 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 ANKRD13AQ8IZ07 590 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 GPD1LQ8N335 351 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 LNX1Q8TBB1 728 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 RFFLQ8WZ73 363 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SH2D3AQ9BRG2 576 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SELENOOQ9BVL4 669 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 NIFKQ9BYG3 293 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SPATC1LQ9H0A9 340 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 TMEM117Q9H0C3 514 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 POLR3FQ9H1D9 316 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 XPNPEP1Q9NQW7 623 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 ARHGAP28Q9P2N2 729 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 LOC102724159A0A0B4J2E5 919 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SPDYE5A6NIY4 337 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 TISP43B9A030 160 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 ANKRD63C9JTQ0 380 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 ZC3H11AO75152 810 aaKnown RBP eCLIP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 KIF4AO95239 1232 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 PIGRP01833 764 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 ADRB2P07550 413 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 NOP2P46087 812 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 GCLMP48507 274 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 GPC3P51654 580 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 MFAP3P55082 362 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 DLG4P78352 724 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 SMC1AQ14683 1233 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 TCEAL1Q15170 157 aa11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 PWP2Q15269 919 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-201ENST00000379340 ARHGAP44Q17R89 818 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms