RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 WDR6Q9NNW5 1121 aaKnown RBP19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 HES2Q9Y543 173 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 DOCK8Q8NF50 2099 aa19.87■□□□□ 0.77
PDLIM4-202ENST00000379018 TDRD15B5MCY1 1934 aaKnown RBP19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 CYP3A7-CYP3A51PA0A087WV96 503 aa19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 CPLX1O14810 134 aa19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 CYP3A7P24462 503 aa19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 HOXA11P31270 313 aaPredicted RBP19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 SCNN1GP51170 649 aa19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 ERMP1Q7Z2K6 904 aa19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 SMG8Q8ND04 991 aaKnown RBP19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 WRAP73Q9P2S5 460 aaPredicted RBP19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 IPPQ9Y573 584 aa19.86■□□□□ 0.77
PDLIM4-202ENST00000379018 DCNP07585 359 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 NCLP19338 710 aaKnown RBP19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 HSPA4P34932 840 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 STK3Q13188 491 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 EMC2Q15006 297 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 COLGALT2Q8IYK4 626 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 KIAA2013Q8IYS2 634 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 SLC44A3Q8N4M1 653 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 CMASQ8NFW8 434 aaPredicted RBP19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 GPR152Q8TDT2 470 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 ZFP42Q96MM3 310 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 LXNQ9BS40 222 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 WNT16Q9UBV4 365 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 SSX2IPQ9Y2D8 614 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 DCHS1Q96JQ0 3298 aa19.85■□□□□ 0.77
PDLIM4-202ENST00000379018 ARL5CA6NH57 179 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 MARCH6O60337 910 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 LMNAP02545 664 aaKnown RBP19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 PSMA5P28066 241 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 XKR9Q5GH70 373 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 NCAPH2Q6IBW4 605 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 RABGGTAQ92696 567 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 KCNB2Q92953 911 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 DHX33Q9H6R0 707 aaKnown RBP19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 MIOSQ9NXC5 875 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 DPP7Q9UHL4 492 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 VAV3Q9UKW4 847 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 KCNJ14Q9UNX9 436 aa19.84■□□□□ 0.77
PDLIM4-202ENST00000379018 WDR87Q6ZQQ6 2873 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 INO80B-WBP1J3KQ70 363 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 DKC1O60832 514 aaKnown RBP eCLIP19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 DEXIO95424 95 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 P4HBP07237 508 aaKnown RBP19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 SRFP11831 508 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 RPL17P18621 184 aaKnown RBP19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 YWHABP31946 246 aaKnown RBP19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 RFC5P40937 340 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 CYP4A11Q02928 519 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 PPP2R5CQ13362 524 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 CTTNQ14247 550 aaKnown RBP19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 KIAA0319Q5VV43 1072 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 KRT25Q7Z3Z0 450 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 FERMT3Q86UX7 667 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 ZNF707Q96C28 371 aaPredicted RBP19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 MBOAT7Q96N66 472 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 AGXT2Q9BYV1 514 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 TRIM6Q9C030 488 aaPredicted RBP19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 RGL1Q9NZL6 768 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 EPS15L1Q9UBC2 864 aa19.83■□□□□ 0.77
PDLIM4-202ENST00000379018 ARID2Q68CP9 1835 aa19.83■□□□□ 0.76
PDLIM4-202ENST00000379018 DOCK6Q96HP0 2047 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 CCDC194A0A1B0GVG4 234 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 M0R2N6 131 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 ZBTB39O15060 712 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 GAS2O43903 313 aaKnown RBP19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 TSPAN1O60635 241 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 NR1I2O75469 434 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 DSG1Q02413 1049 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 NPY5RQ15761 445 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 NOTUMQ6P988 496 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 MOXD1Q6UVY6 613 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 DAGLBQ8NCG7 672 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 CNNM3Q8NE01 707 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 TCP11Q8WWU5 503 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 DYDC2Q96IM9 177 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 MTRQ99707 1265 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 NXF3Q9H4D5 531 aaKnown RBP19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 UBN1Q9NPG3 1134 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 ARHGEF3Q9NR81 526 aa19.82■□□□□ 0.76
PDLIM4-202ENST00000379018 MTCL1Q9Y4B5 1905 aaKnown RBP19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 TGM5O43548 720 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 CCNT1O60563 726 aaKnown RBP19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 DTNBO60941 627 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 TOB2Q14106 344 aaPredicted RBP19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 FUT10Q6P4F1 479 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 CDR2LQ86X02 465 aaPredicted RBP19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 EXOC8Q8IYI6 725 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 RMDN1Q96DB5 314 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 COLEC11Q9BWP8 271 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 GPR62Q9BZJ7 368 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 FOXQ1Q9C009 403 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 RXFP1Q9HBX9 757 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 KLK14Q9P0G3 267 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 CACNG4Q9UBN1 327 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 NUMBLQ9Y6R0 609 aa19.81■□□□□ 0.76
PDLIM4-202ENST00000379018 LAMP2P13473 410 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms