RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 KIAA1024Q9UPX6 916 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 ALG6Q9Y672 507 aa8.81□□□□□ -1
PTPRR-203ENST00000378778 COL5A3P25940 1745 aaPredicted RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 SORBS3O60504 671 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 RPA1P27694 616 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 CDK8P49336 464 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 PEX5P50542 639 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 BIRC2Q13490 618 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 PTK6Q13882 451 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 GSTA3Q16772 222 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 SLC13A5Q86YT5 568 aaPredicted RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 SLC9A9Q8IVB4 645 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 RBBP8NLQ8NC74 664 aaPredicted RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 EPS8L3Q8TE67 593 aaKnown RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 SNF8Q96H20 258 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 PHACTR1Q9C0D0 580 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 UVRAGQ9P2Y5 699 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 SMG5Q9UPR3 1016 aaKnown RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 PRPF4O43172 522 aaKnown RBP eCLIP8.8□□□□□ -1
PTPRR-203ENST00000378778 ZWINTO95229 277 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 TPBGLP0DKB5 382 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 CTCFP49711 727 aaPredicted RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 OCRLQ01968 901 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 ENOX2Q16206 610 aaKnown RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 ECM1Q16610 540 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 SLC5A9Q2M3M2 681 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 GLG1Q92896 1179 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 CD101Q93033 1021 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 FAM20AQ96MK3 541 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 AGPAT1Q99943 283 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 POLR3CQ9BUI4 534 aaPredicted RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 ETNK1Q9HBU6 452 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 ERVK-5Q9HDB9 667 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 PAPOLBQ9NRJ5 636 aaKnown RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 TMEM260Q9NX78 707 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 KCND2Q9NZV8 630 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 LARSQ9P2J5 1176 aaKnown RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 APEX2Q9UBZ4 518 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 DNAJC12Q9UKB3 198 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 LRCH1Q9Y2L9 728 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.8□□□□□ -1
PTPRR-203ENST00000378778 IRS2Q9Y4H2 1338 aa8.8□□□□□ -1
PTPRR-203ENST00000378778 ASTN1O14525 1302 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 FSCN2O14926 492 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 PEX11AO75192 247 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 AKAP3O75969 853 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 RTN3O95197 1032 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 SKIP12755 728 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 BRAFP15056 766 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 IFNAR2P48551 515 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 TNNI2P48788 182 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 FMO5P49326 533 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 RAB27AP51159 221 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 MCCD1P59942 119 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 RPS8P62241 208 aaKnown RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 CENPCQ03188 943 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 CETN1Q12798 172 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 DRAP1Q14919 205 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 Q4G0T1 1027 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 SLC45A4Q5BKX6 768 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 ZC3H12AQ5D1E8 599 aaKnown RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 ARSHQ5FYA8 562 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 CCDC105Q8IYK2 499 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 SPDYE1Q8NFV5 336 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 FAM163AQ96GL9 167 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 TTC25Q96NG3 672 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 TRAIPQ9BWF2 469 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 PITPNM3Q9BZ71 974 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 MMADHCQ9H3L0 296 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 CDC42EP4Q9H3Q1 356 aaKnown RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 GOLPH3Q9H4A6 298 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 NR2E1Q9Y466 385 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 CD2APQ9Y5K6 639 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 ZNF335Q9H4Z2 1342 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 E9PMD0 336 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 TBCAO75347 108 aaKnown RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 GAS8O95995 478 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 PRDX5P30044 214 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 PCK1P35558 622 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 VHLP40337 213 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 ABL2P42684 1182 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 CRKLP46109 303 aaKnown RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 MXRA7P84157 204 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 DCAF17Q5H9S7 520 aaPredicted RBP8.79□□□□□ -1
PTPRR-203ENST00000378778 ANO7Q6IWH7 933 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 VSIG1Q86XK7 387 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 GLYCTKQ8IVS8 523 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 FAM186BQ8IYM0 893 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 DNAJC9Q8WXX5 260 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 ALG3Q92685 438 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 C18orf8Q96DM3 657 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 DYNLL2Q96FJ2 89 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 OSGEPQ9NPF4 335 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 PDP2Q9P2J9 529 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 SBF2Q86WG5 1849 aa8.79□□□□□ -1
PTPRR-203ENST00000378778 FAM47DPA6NHR8 397 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 FOSP01100 380 aaPredicted RBP8.78□□□□□ -1
PTPRR-203ENST00000378778 GOLGA8HP0CJ92 632 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 TAC1P20366 129 aa8.78□□□□□ -1
PTPRR-203ENST00000378778 IBSPP21815 317 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms