RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 LAD1O00515 517 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 WNT7AO00755 349 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 ATP2B1P20020 1258 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 RFC5P40937 340 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 ME1P48163 572 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 ATP2C1P98194 919 aaPredicted RBP15.24■□□□□ 0.03
PRPF18-202ENST00000378572 SIGLEC14Q08ET2 396 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 PTPN21Q16825 1174 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 XKR9Q5GH70 373 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 PPP4R3AQ6IN85 833 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 TMEM173Q86WV6 379 aaPredicted RBP15.24■□□□□ 0.03
PRPF18-202ENST00000378572 RSPH1Q8WYR4 309 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 S1PR5Q9H228 398 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 KCNMB3Q9NPA1 279 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 AGPAT5Q9NUQ2 364 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 PCDHA7Q9UN72 937 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 PCDHB2Q9Y5E7 798 aa15.24■□□□□ 0.03
PRPF18-202ENST00000378572 CARNS1A5YM72 827 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 ERLIN2O94905 339 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 SSBP05455 408 aaKnown RBP eCLIP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 WEE2P0C1S8 567 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 YWHABP31946 246 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 MRE11P49959 708 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 KCNC3Q14003 757 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 EMC2Q15006 297 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 ZNF174Q15697 407 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 ARL6IP4Q66PJ3 421 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 OTUD6AQ7L8S5 288 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 ZNF579Q8NAF0 562 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 TCP11Q8WWU5 503 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 PRPF31Q8WWY3 499 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 DYDC2Q96IM9 177 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 RIPOR3Q96MK2 946 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 NECTIN4Q96NY8 510 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 NRDE2Q9H7Z3 1164 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 DZANK1Q9NVP4 752 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 CUTAO60888 179 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 MTHFRP42898 656 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 ITIH3Q06033 890 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 LAMTOR4Q0VGL1 99 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 CTTNQ14247 550 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 EPHA7Q15375 998 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 FBXL6Q8N531 539 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 C12orf76Q8N812 135 aaPredicted RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 C4orf32Q8N8J7 132 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 KRI1Q8N9T8 703 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 IGSF21Q96ID5 467 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 POMKQ9H5K3 350 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 RSAD1Q9HA92 442 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 RGL1Q9NZL6 768 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 DNAJB4Q9UDY4 337 aa15.23■□□□□ 0.03
PRPF18-202ENST00000378572 FBXO2Q9UK22 296 aaPredicted RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 DBR1Q9UK59 544 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 SRPRBQ9Y5M8 271 aaKnown RBP15.23■□□□□ 0.03
PRPF18-202ENST00000378572 TRIOO75962 3097 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 TBX3O15119 743 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 OFD1O75665 1012 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 GALTP07902 379 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 EPCAMP16422 314 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 MCM7P33993 719 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 PRPHP41219 470 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 SLC11A1P49279 550 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 PTGDRQ13258 359 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 GIT2Q14161 759 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 SRGAP1Q7Z6B7 1085 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 DDX53Q86TM3 631 aaKnown RBP15.22■□□□□ 0.03
PRPF18-202ENST00000378572 CABP7Q86V35 215 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 SLFN12Q8IYM2 578 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 MTRQ99707 1265 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 TRAIPQ9BWF2 469 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 ADAM7Q9H2U9 754 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 ZSWIM4Q9H7M6 989 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 IFT122Q9HBG6 1241 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 WRAP73Q9P2S5 460 aaPredicted RBP15.22■□□□□ 0.03
PRPF18-202ENST00000378572 PPME1Q9Y570 386 aa15.22■□□□□ 0.03
PRPF18-202ENST00000378572 POMCP01189 267 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 CTSAP10619 480 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 MARCKSP29966 332 aaPredicted RBP15.21■□□□□ 0.03
PRPF18-202ENST00000378572 PTPN5P54829 565 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 BMP8AQ7Z5Y6 402 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 TDRD5Q8NAT2 981 aaKnown RBP15.21■□□□□ 0.03
PRPF18-202ENST00000378572 KREMEN2Q8NCW0 462 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 BCL7CQ8WUZ0 217 aaPredicted RBP15.21■□□□□ 0.03
PRPF18-202ENST00000378572 APOL6Q9BWW8 343 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 DHX33Q9H6R0 707 aaKnown RBP15.21■□□□□ 0.03
PRPF18-202ENST00000378572 ZNF318Q5VUA4 2279 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 PIEZO1Q92508 2521 aa15.21■□□□□ 0.03
PRPF18-202ENST00000378572 CNTNAP2Q9UHC6 1331 aa15.21■□□□□ 0.02
PRPF18-202ENST00000378572 C2CD4DB7Z1M9 353 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 GAS2O43903 313 aaKnown RBP15.2■□□□□ 0.02
PRPF18-202ENST00000378572 NEMFO60524 1076 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 ZNF623O75123 536 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 CMA1P23946 247 aa15.2■□□□□ 0.02
PRPF18-202ENST00000378572 NCBP1Q09161 790 aaKnown RBP15.2■□□□□ 0.02
PRPF18-202ENST00000378572 MTMR3Q13615 1198 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms