RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 CNOT7Q9UIV1 285 aaKnown RBP19.37■□□□□ 0.69
GNE-201ENST00000377902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.36■□□□□ 0.69
GNE-201ENST00000377902 NDUFB10O96000 172 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 CIITAP33076 1130 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 COILP38432 576 aaPredicted RBP19.36■□□□□ 0.69
GNE-201ENST00000377902 GPC5P78333 572 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 ICA1Q05084 483 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 LRCH2Q5VUJ6 765 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 ANKRD42Q8N9B4 389 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 CERKQ8TCT0 537 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 C1orf54Q8WWF1 131 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 PWWP2AQ96N64 755 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 DONSONQ9NYP3 566 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 PFASO15067 1338 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 A8MUI8 341 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 TP73O15350 636 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 SNX3O60493 162 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 GH1P01241 217 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 TLDC1Q6P9B6 456 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 SEPT14Q6ZU15 432 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 GDAP1Q8TB36 358 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 DYDC1Q8WWB3 177 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 THOC1Q96FV9 657 aaKnown RBP19.36■□□□□ 0.69
GNE-201ENST00000377902 SH2D3AQ9BRG2 576 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 MKNK1Q9BUB5 465 aa19.36■□□□□ 0.69
GNE-201ENST00000377902 PODXLO00592 558 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 BBOX1O75936 387 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 CFBP00751 764 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 DLATP10515 647 aaKnown RBP19.35■□□□□ 0.69
GNE-201ENST00000377902 CHKAP35790 457 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 SIX1Q15475 284 aaPredicted RBP19.35■□□□□ 0.69
GNE-201ENST00000377902 TRIP13Q15645 432 aaPredicted RBP19.35■□□□□ 0.69
GNE-201ENST00000377902 TNFAIP8L3Q5GJ75 292 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 SH3BP5LQ7L8J4 393 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 TRMT1LQ7Z2T5 733 aaKnown RBP19.35■□□□□ 0.69
GNE-201ENST00000377902 RPAINQ86UA6 219 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 ART4Q93070 314 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 MKL1Q969V6 931 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 CDC42EP4Q9H3Q1 356 aaKnown RBP19.35■□□□□ 0.69
GNE-201ENST00000377902 PNMA3Q9UL41 463 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 AFF2P51816 1311 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 ALAS1P13196 640 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 RARGP13631 454 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 SLC8A1P32418 973 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 MYO1EQ12965 1108 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 SEL1L2Q5TEA6 688 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 C11orf63Q6NUN7 778 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 NOP9Q86U38 636 aaKnown RBP19.35■□□□□ 0.69
GNE-201ENST00000377902 MIEF2Q96C03 454 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 AAASQ9NRG9 546 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.35■□□□□ 0.69
GNE-201ENST00000377902 TRIM33Q9UPN9 1127 aa19.35■□□□□ 0.69
GNE-201ENST00000377902 TMEM120BA0PK00 339 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 CALCAP01258 141 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 CHRNB2P17787 502 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 ZKSCAN8Q15776 578 aaPredicted RBP19.34■□□□□ 0.69
GNE-201ENST00000377902 SLC15A2Q16348 729 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 SYDE2Q5VT97 1194 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 SLC47A2Q86VL8 602 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 SLC13A5Q86YT5 568 aaPredicted RBP19.34■□□□□ 0.69
GNE-201ENST00000377902 CCDC17Q96LX7 622 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 LRRC4BQ9NT99 713 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 GREB1LQ9C091 1923 aaPredicted RBP19.34■□□□□ 0.69
GNE-201ENST00000377902 MIF4GDA9UHW6 222 aaKnown RBP19.34■□□□□ 0.69
GNE-201ENST00000377902 CLDN3O15551 220 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 CLNS1AP54105 237 aaKnown RBP19.34■□□□□ 0.69
GNE-201ENST00000377902 MPP2Q14168 576 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 TNIP1Q15025 636 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 SAMD1Q6SPF0 538 aaPredicted RBP19.34■□□□□ 0.69
GNE-201ENST00000377902 AGAP11Q8TF27 550 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 ARHGEF2Q92974 986 aaKnown RBP19.34■□□□□ 0.69
GNE-201ENST00000377902 CBWD1Q9BRT8 395 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 CCDC134Q9H6E4 229 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 NYAP2Q9P242 653 aa19.34■□□□□ 0.69
GNE-201ENST00000377902 BTAF1O14981 1849 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 DDX39AO00148 427 aaKnown RBP19.33■□□□□ 0.69
GNE-201ENST00000377902 CYP26A1O43174 497 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 SPOPO43791 374 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 PSMD10O75832 226 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 FOSP01100 380 aaPredicted RBP19.33■□□□□ 0.69
GNE-201ENST00000377902 BCRP11274 1271 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 GBP2P32456 591 aaPredicted RBP19.33■□□□□ 0.69
GNE-201ENST00000377902 NCALDP61601 193 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 PPP2R5AQ15172 486 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 NUGGCQ68CJ6 796 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 DAW1Q8N136 415 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 PLEKHO2Q8TD55 490 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 ATG4AQ8WYN0 398 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 CD101Q93033 1021 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 TEKT1Q969V4 418 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 ECT2Q9H8V3 914 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 ATP6V0A4Q9HBG4 840 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 KCNK9Q9NPC2 374 aa19.33■□□□□ 0.69
GNE-201ENST00000377902 MYH11P35749 1972 aa19.33■□□□□ 0.68
GNE-201ENST00000377902 HIP1RO75146 1068 aa19.33■□□□□ 0.68
GNE-201ENST00000377902 GSTA1P08263 222 aa19.33■□□□□ 0.68
GNE-201ENST00000377902 GYS1P13807 737 aa19.33■□□□□ 0.68
GNE-201ENST00000377902 CDC25CP30307 473 aa19.33■□□□□ 0.68
GNE-201ENST00000377902 ALDH5A1P51649 535 aaPredicted RBP19.33■□□□□ 0.68
GNE-201ENST00000377902 NFIL3Q16649 462 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms