RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 CCDC157Q569K6 752 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 IYDQ6PHW0 289 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 RNF135Q8IUD6 432 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 UNC45BQ8IWX7 931 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 VPS33AQ96AX1 596 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 MSTO1Q9BUK6 570 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 MAP3K20Q9NYL2 800 aaKnown RBP11.25□□□□□ -0.61
RTN3-206ENST00000377819 TJP2Q9UDY2 1190 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 GFPT2O94808 682 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 HPGDP15428 266 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 CMA1P23946 247 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 SERPINH1P50454 418 aaKnown RBP11.25□□□□□ -0.61
RTN3-206ENST00000377819 RBM6P78332 1123 aaKnown RBP11.25□□□□□ -0.61
RTN3-206ENST00000377819 MRPS35P82673 323 aaKnown RBP11.25□□□□□ -0.61
RTN3-206ENST00000377819 SCARA5Q6ZMJ2 495 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 PPP4R3CPQ6ZMV5 832 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 EEPD1Q7L9B9 569 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 DDX53Q86TM3 631 aaKnown RBP11.25□□□□□ -0.61
RTN3-206ENST00000377819 ZSCAN10Q96SZ4 725 aaPredicted RBP11.25□□□□□ -0.61
RTN3-206ENST00000377819 YIPF3Q9GZM5 350 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 PCIF1Q9H4Z3 704 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 WDR41Q9HAD4 459 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 IMPAD1Q9NX62 359 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 TSC22D4Q9Y3Q8 395 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 PLA2R1Q13018 1463 aa11.25□□□□□ -0.61
RTN3-206ENST00000377819 SPATA31E1Q6ZUB1 1445 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 SEC24DO94855 1032 aaPredicted RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 CAPN1P07384 714 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 HSD17B4P51659 736 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 TNFAIP2Q03169 654 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 SFSWAPQ12872 951 aaKnown RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 CYTH1Q15438 398 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 SLFNL1Q499Z3 407 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 ANKS6Q68DC2 871 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 FAM47EQ6ZV65 393 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 PASD1Q8IV76 773 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 METTL22Q9BUU2 404 aaPredicted RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 CYP4F11Q9HBI6 524 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 INTS13Q9NVM9 706 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 FANCLQ9NW38 375 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 UHRF1BP1Q6BDS2 1440 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 MYO1GB0I1T2 1018 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 CPB1P15086 417 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 NRG3P56975 720 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 PWP1Q13610 501 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 CUL4AQ13619 759 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 EFHC2Q5JST6 749 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 VN1R5Q7Z5H4 357 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 DENND6AQ8IWF6 608 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 BEST2Q8NFU1 509 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 PPP1R13BQ96KQ4 1090 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 BRD8Q9H0E9 1235 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 KRT84Q9NSB2 600 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 HECW2Q9P2P5 1572 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 hCG_2014768A0A024R1R8 64 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 MIF4GDA9UHW6 222 aaKnown RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 RSPH10B2B2RC85 870 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 RSPH10BP0C881 870 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 ALOX15P16050 662 aaPredicted RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 PSMA4P25789 261 aaKnown RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 CCND2P30279 289 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 CAV1Q03135 178 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 RBBP7Q16576 425 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 C8orf58Q8NAV2 365 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 EEF2KMTQ96G04 330 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 ERAP1Q9NZ08 941 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 SERPINB13Q9UIV8 391 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 S100A9P06702 114 aaKnown RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 BRAFP15056 766 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 YWHAZP63104 245 aaKnown RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 MTHFD1LQ6UB35 978 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 SLC35F6Q8N357 371 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 ZNF513Q8N8E2 541 aaPredicted RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 LBHD1Q9BQE6 289 aaPredicted RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 CYP39A1Q9NYL5 469 aa11.24□□□□□ -0.61
RTN3-206ENST00000377819 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
RTN3-206ENST00000377819 FLT3P36888 993 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 CEBPAP49715 358 aaPredicted RBP11.23□□□□□ -0.61
RTN3-206ENST00000377819 RGS4P49798 205 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 CCT8P50990 548 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 VSNL1P62760 191 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 KRT76Q01546 638 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 ARHGEF7Q14155 803 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 ASPRV1Q53RT3 343 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 NLGN1Q8N2Q7 840 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 FAM45AQ8TCE6 357 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 COA7Q96BR5 231 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 FAM167AQ96KS9 214 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 TMEM106CQ9BVX2 250 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 PIGUQ9H490 435 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 VIPAS39Q9H9C1 493 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 KANSL2Q9H9L4 492 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 ZNF304Q9HCX3 659 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 BTG4Q9NY30 223 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 DUOX2Q9NRD8 1548 aa11.23□□□□□ -0.61
RTN3-206ENST00000377819 MEFVO15553 781 aaPredicted RBP11.23□□□□□ -0.61
RTN3-206ENST00000377819 GSPT1P15170 499 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms