RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 MYH4Q9Y623 1939 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 PYGMP11217 842 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 RARRES1P49788 294 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 CALCOCO2Q13137 446 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 DPY19L2P1Q6NXN4 242 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 NOP9Q86U38 636 aaKnown RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 ERP44Q9BS26 406 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 MTRF1LQ9UGC7 380 aaKnown RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 MTUS1Q9ULD2 1270 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 ADAMTSL1Q8N6G6 1762 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 GMNCA6NCL1 334 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 FOXO6A8MYZ6 492 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 PDE6CP51160 858 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 PMS2P54278 862 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 SETQ01105 290 aaPredicted RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 TKFCQ3LXA3 575 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 SEZ6Q53EL9 994 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 UBAP2Q5T6F2 1119 aaKnown RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 FOXR2Q6PJQ5 311 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 TAS1R2Q8TE23 839 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 FAM151AQ8WW52 585 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 TATDN2Q93075 761 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 ZNF668Q96K58 619 aaPredicted RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 CALR3Q96L12 384 aaKnown RBP13.91□□□□□ -0.18
USP11-204ENST00000377107 PCDHB18PQ96TA0 734 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 TMEM117Q9H0C3 514 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 TMEM206Q9H813 350 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 KLHL11Q9NVR0 708 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 ANAPC7Q9UJX3 599 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 ODF2LQ9ULJ1 636 aa13.91□□□□□ -0.18
USP11-204ENST00000377107 ADRB2P07550 413 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 RSBN1LQ6PCB5 846 aaPredicted RBP13.9□□□□□ -0.18
USP11-204ENST00000377107 NLRX1Q86UT6 975 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 NEK9Q8TD19 979 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 TRIM7Q9C029 511 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 ANKFY1Q9P2R3 1169 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 GABBR1Q9UBS5 961 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
USP11-204ENST00000377107 SBF2Q86WG5 1849 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 TNFRSF8P28908 595 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 ECHS1P30084 290 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 IFI35P80217 286 aaPredicted RBP13.9□□□□□ -0.18
USP11-204ENST00000377107 SKOR1P84550 965 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 SPP2Q13103 211 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 DMP1Q13316 513 aaPredicted RBP13.9□□□□□ -0.18
USP11-204ENST00000377107 RASA3Q14644 834 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 QPCTQ16769 361 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 KAZNQ674X7 775 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 BTNL9Q6UXG8 535 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 EPS8L3Q8TE67 593 aaKnown RBP13.9□□□□□ -0.18
USP11-204ENST00000377107 CYFIP2Q96F07 1278 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 BORCS6Q96GS4 357 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 PSMD1Q99460 953 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 MKNK1Q9BUB5 465 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 TRPC6Q9Y210 931 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 CAP2P40123 477 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 MTMR2Q13614 643 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 PPP2R5AQ15172 486 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 MTERF2Q49AM1 385 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 RHOT2Q8IXI1 618 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 ZC3H3Q8IXZ2 948 aaKnown RBP13.9□□□□□ -0.18
USP11-204ENST00000377107 NT5C1BQ96P26 610 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 FIZ1Q96SL8 496 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 TMEM59LQ9UK28 342 aa13.9□□□□□ -0.18
USP11-204ENST00000377107 GTPBP10A4D1E9 387 aaKnown RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 DDX3YO15523 660 aaKnown RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 MEFVO15553 781 aaPredicted RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 ASNSP08243 561 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 PLS3P13797 630 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 CNGA1P29973 690 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 MAPK4P31152 587 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 ACOT2P49753 483 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 MFAP3P55082 362 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 MAPK7Q13164 816 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 SWSAP1Q6NVH7 229 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 GSTA5Q7RTV2 222 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 CEP57Q86XR8 500 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 PRPF38AQ8NAV1 312 aaKnown RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 PLEKHO2Q8TD55 490 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 RAPGEF5Q92565 580 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 KAT2BQ92831 832 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 SEMA4DQ92854 862 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 SCLT1Q96NL6 688 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 TCHPQ9BT92 498 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 TAOK3Q9H2K8 898 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 FEM1BQ9UK73 627 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 PIK3CDO00329 1044 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 EN1Q05925 392 aaPredicted RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 ZNF394Q53GI3 561 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 SGO2Q562F6 1265 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 GPATCH11Q8N954 259 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 RPL21P46778 160 aaKnown RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 BAATQ14032 418 aaPredicted RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 ZKSCAN8Q15776 578 aaPredicted RBP13.89□□□□□ -0.19
USP11-204ENST00000377107 LONRF1Q17RB8 773 aa13.89□□□□□ -0.19
USP11-204ENST00000377107 RNF207Q6ZRF8 634 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms