RNA–Protein interactions for RNA: ENST00000376861.5

HLA-F-218, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-218ENST00000376861 TMX1Q9H3N1 280 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 ENPP3O14638 875 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 UPP2O95045 317 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 STAG3L1P0CL83 205 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 ARF4P18085 180 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-218ENST00000376861 BMP6P22004 513 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 ZNF165P49910 485 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 LIG4P49917 911 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 WDR5P61964 334 aaKnown RBP18.59■□□□□ 0.57
HLA-F-218ENST00000376861 CT47A1Q5JQC4 288 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-218ENST00000376861 C11orf57Q6ZUT1 292 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-218ENST00000376861 HVCN1Q96D96 273 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 CCDC51Q96ER9 411 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 CCDC113Q9H0I3 377 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 TSPYL2Q9H2G4 693 aaPredicted RBP18.59■□□□□ 0.57
HLA-F-218ENST00000376861 SLC39A2Q9NP94 309 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 RGS18Q9NS28 235 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 TBX20Q9UMR3 447 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 PCDHB7Q9Y5E2 793 aa18.59■□□□□ 0.57
HLA-F-218ENST00000376861 CNTNAP2Q9UHC6 1331 aa18.58■□□□□ 0.57
HLA-F-218ENST00000376861 MICAL3Q7RTP6 2002 aa18.58■□□□□ 0.57
HLA-F-218ENST00000376861 HNRNPDLO14979 420 aaKnown RBP18.58■□□□□ 0.56
HLA-F-218ENST00000376861 B4GALT5O43286 388 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 PPP1R2P41236 205 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 RAB27AP51159 221 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 GTF2BQ00403 316 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 STIM1Q13586 685 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 ZC2HC1CQ53FD0 456 aaPredicted RBP18.58■□□□□ 0.56
HLA-F-218ENST00000376861 ATF7IP2Q5U623 682 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 RNF169Q8NCN4 708 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 VWCEQ96DN2 955 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 ACCSQ96QU6 501 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 SLC9A7Q96T83 725 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 ST6GALNAC4Q9H4F1 302 aa18.58■□□□□ 0.56
HLA-F-218ENST00000376861 MGEA5O60502 916 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 KIF20AO95235 890 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 ATP2A2P16615 1042 aaKnown RBP18.57■□□□□ 0.56
HLA-F-218ENST00000376861 EHHADHQ08426 723 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
HLA-F-218ENST00000376861 SLC27A1Q6PCB7 646 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.57■□□□□ 0.565e-7■■□□□ 11.4
HLA-F-218ENST00000376861 HPS3Q969F9 1004 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 BPIFA3Q9BQP9 254 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 TARS2Q9BW92 718 aaKnown RBP18.57■□□□□ 0.56
HLA-F-218ENST00000376861 TMEM206Q9H813 350 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 FAM105AQ9NUU6 356 aa18.57■□□□□ 0.56
HLA-F-218ENST00000376861 CXXC1Q9P0U4 656 aaPredicted RBP18.57■□□□□ 0.56
HLA-F-218ENST00000376861 A0A1B0GUA9 196 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 FSD2A1L4K1 749 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 MYBP10242 640 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 DSC3Q14574 896 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 AMHR2Q16671 573 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 TCTN1Q2MV58 587 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 CDR2LQ86X02 465 aaPredicted RBP18.56■□□□□ 0.56
HLA-F-218ENST00000376861 PHOSPHO2Q8TCD6 241 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 PGBD4Q96DM1 585 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 RBSNQ9H1K0 784 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 ANKFY1Q9P2R3 1169 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 GDAQ9Y2T3 454 aa18.56■□□□□ 0.56
HLA-F-218ENST00000376861 A0A0U1RQF3 1178 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-218ENST00000376861 EIF3DO15371 548 aaKnown RBP eCLIP18.55■□□□□ 0.56
HLA-F-218ENST00000376861 CLDN3O15551 220 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 PRPF6O94906 941 aaKnown RBP18.55■□□□□ 0.56
HLA-F-218ENST00000376861 NPTXRO95502 500 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 HOXA11P31270 313 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-218ENST00000376861 DCAF4L1Q3SXM0 396 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 ZNF568Q3ZCX4 644 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 COBLL1Q53SF7 1204 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 FAM117BQ6P1L5 589 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 ZPBP2Q6X784 338 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 RTN4RL1Q86UN2 441 aaPredicted RBP18.55■□□□□ 0.56
HLA-F-218ENST00000376861 ABI1Q8IZP0 508 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 RNF214Q8ND24 703 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 FIZ1Q96SL8 496 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 ACO2Q99798 780 aaKnown RBP18.55■□□□□ 0.56
HLA-F-218ENST00000376861 CBX8Q9HC52 389 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 USP20Q9Y2K6 914 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 PCDHB2Q9Y5E7 798 aa18.55■□□□□ 0.56
HLA-F-218ENST00000376861 UBE4BO95155 1302 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 TOM1L1O75674 476 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 EOMESO95936 686 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 HARSP12081 509 aaKnown RBP18.54■□□□□ 0.56
HLA-F-218ENST00000376861 ERCC5P28715 1186 aaPredicted RBP18.54■□□□□ 0.56
HLA-F-218ENST00000376861 DEFB103AP81534 67 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 STK4Q13043 487 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 SLFN12LQ6IEE8 588 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 TAS1R3Q7RTX0 852 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 ZBTB33Q86T24 672 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 ECHDC2Q86YB7 292 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 NPAS4Q8IUM7 802 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 MAP4K3Q8IVH8 894 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 SMYD4Q8IYR2 804 aaPredicted RBP18.54■□□□□ 0.56
HLA-F-218ENST00000376861 COLQQ9Y215 455 aaPredicted RBP18.54■□□□□ 0.56
HLA-F-218ENST00000376861 TNFSF13BQ9Y275 285 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.54■□□□□ 0.56
HLA-F-218ENST00000376861 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.54■□□□□ 0.56
HLA-F-218ENST00000376861 A0A1W2PPC1 479 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 BECN2A8MW95 431 aa18.54■□□□□ 0.56
HLA-F-218ENST00000376861 PPP1R3GB7ZBB8 358 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms