RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 ELOA2Q8IYF1 753 aaPredicted RBP12.54□□□□□ -0.4
DDR1-227ENST00000376570 ZNF280CQ8ND82 737 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 C18orf8Q96DM3 657 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.54□□□□□ -0.4
DDR1-227ENST00000376570 ALG6Q9Y672 507 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 LRRD1A4D1F6 860 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 EDIL3O43854 480 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 CYP3A4P08684 503 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 CETN2P41208 172 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 NPTX2P47972 431 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 RARRES1P49788 294 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 MFAP3P55082 362 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 MAGOHP61326 146 aaKnown RBP12.54□□□□□ -0.4
DDR1-227ENST00000376570 FAM47CQ5HY64 1035 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 ICE2Q659A1 982 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 LRRC31Q6UY01 552 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 NSUN6Q8TEA1 469 aaKnown RBP12.54□□□□□ -0.4
DDR1-227ENST00000376570 NR2E1Q9Y466 385 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 ZNF233A6NK53 670 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 TUBB2AQ13885 445 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 CYP4A22Q5TCH4 519 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 DENND2CQ68D51 928 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 PHLDB3Q6NSJ2 640 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 USP37Q86T82 979 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 ZNF564Q8TBZ8 553 aaPredicted RBP12.54□□□□□ -0.4
DDR1-227ENST00000376570 GMCL1Q96IK5 515 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 AGPAT1Q99943 283 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 TUBB2BQ9BVA1 445 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 CALN1Q9BXU9 219 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 TMEM117Q9H0C3 514 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 AS3MTQ9HBK9 375 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 IVNS1ABPQ9Y6Y0 642 aa12.54□□□□□ -0.4
DDR1-227ENST00000376570 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 LACTBP83111 547 aaPredicted RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 PPFIA1Q13136 1202 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 NAB2Q15742 525 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 NLGN2Q8NFZ4 835 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 PDCD2LQ9BRP1 358 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 KCTD10Q9H3F6 313 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 SLC9A2Q9UBY0 812 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 FBXO40Q9UH90 709 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 DBR1Q9UK59 544 aaKnown RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 PHLPP1O60346 1717 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 MYH8P13535 1937 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 RGS16O15492 202 aaPredicted RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 PPFIA4O75335 1185 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 SNHG28P0DPA3 235 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 MAGEA9P43362 315 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 CLCN3P51790 818 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 FSTL1Q12841 308 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 KCTD2Q14681 263 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 SYCE1Q8N0S2 351 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 RBAKQ9NYW8 714 aaPredicted RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 MTRF1LQ9UGC7 380 aaKnown RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 ITGB4P16144 1822 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 EIF4E1BA6NMX2 242 aaKnown RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 PSAPP07602 524 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 ACTN3Q08043 901 aaPredicted RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 MMS22LQ6ZRQ5 1243 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 CCDC121Q6ZUS5 278 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 HOOK3Q86VS8 718 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 C9orf72Q96LT7 481 aa12.53□□□□□ -0.4
DDR1-227ENST00000376570 TRIM6Q9C030 488 aaPredicted RBP12.53□□□□□ -0.4
DDR1-227ENST00000376570 OPLAHO14841 1288 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 ICAM1P05362 532 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 KRT10P13645 584 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 ACTR2P61160 394 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 INTS8Q75QN2 995 aaKnown RBP12.52□□□□□ -0.4
DDR1-227ENST00000376570 PNMA8AQ86V59 439 aaPredicted RBP12.52□□□□□ -0.4
DDR1-227ENST00000376570 PACS2Q86VP3 889 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 FBXO16Q8IX29 292 aaPredicted RBP12.52□□□□□ -0.4
DDR1-227ENST00000376570 PAF1Q8N7H5 531 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 CLMNQ96JQ2 1002 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 PSMD1Q99460 953 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 FMO2Q99518 471 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.4
DDR1-227ENST00000376570 ZNF302Q9NR11 478 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 ADAM22Q9P0K1 906 aa12.52□□□□□ -0.4
DDR1-227ENST00000376570 RPSAP08865 295 aaKnown RBP12.52□□□□□ -0.41
DDR1-227ENST00000376570 NR1D1P20393 614 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 KCNT1Q5JUK3 1230 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 GLRA4Q5JXX5 417 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 C1orf186Q6ZWK4 172 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 NETO2Q8NC67 525 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 TPCN2Q8NHX9 752 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 TMEM206Q9H813 350 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 IGSF9BQ9UPX0 1349 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 ADRB2P07550 413 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 KRT15P19012 456 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 RAP1GAPP47736 663 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 RGS7P49802 495 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 PPP4R3CPQ6ZMV5 832 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 HSPH1Q92598 858 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 CABS1Q96KC9 395 aa12.52□□□□□ -0.41
DDR1-227ENST00000376570 RPGRIP1Q96KN7 1286 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 703.9 ms