RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 SHC4Q6S5L8 630 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 MRPL1Q9BYD6 325 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 PICK1Q9NRD5 415 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 TBC1D22BQ9NU19 505 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 H7C0C1 242 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 GNGT2O14610 69 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 ZNF18P17022 549 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 ATP5OP48047 213 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 FBXW10Q5XX13 1052 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 HORMAD1Q86X24 394 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 SLC24A2Q9UI40 661 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 TNPO2O14787 897 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 TRIM60Q495X7 471 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 PREPLQ4J6C6 727 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 RAD54LQ92698 747 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 FAM167AQ96KS9 214 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 AGXT2Q9BYV1 514 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CEP170BQ9Y4F5 1589 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 PRDM1O75626 825 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CHN1P15882 459 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CDKAL1Q5VV42 579 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 IRGCQ6NXR0 463 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 NLRP10Q86W26 655 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 NUDCD3Q8IVD9 361 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 RCOR2Q8IZ40 523 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 FBXL13Q8NEE6 735 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 NSL1Q96IY1 281 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CEP19Q96LK0 163 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 ASNSD1Q9NWL6 643 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 SYBUQ9NX95 663 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 HPSEQ9Y251 543 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 SERPINB8P50452 374 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 DCAF15Q66K64 600 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 ZNF564Q8TBZ8 553 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 STAMQ92783 540 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 DYDC2Q96IM9 177 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 ASPSCR1Q9BZE9 553 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 SMARCAL1Q9NZC9 954 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 KIDINS220Q9ULH0 1771 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 KDM1AO60341 852 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 KCNA6P17658 529 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CDC27P30260 824 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CTCFP49711 727 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CEP55Q53EZ4 464 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 PIGOQ8TEQ8 1089 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 WDR60Q8WVS4 1066 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 NR1H4Q96RI1 486 aaPredicted RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 PARVAQ9NVD7 372 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 DNAJC12Q9UKB3 198 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 AFG3L2Q9Y4W6 797 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CBFA2T3O75081 653 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 MAP4P27816 1152 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 REXO1L1PQ8IX06 675 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 CCDC126Q96EE4 140 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 STX18Q9P2W9 335 aaKnown RBP9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 ANAPC7Q9UJX3 599 aa9.34□□□□□ -0.91
SHROOM4-202ENST00000376020 FAM237AA0A1B0GTK4 181 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 HGSO14964 777 aaPredicted RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 PICALMQ13492 652 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 MYBPC2Q14324 1141 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 PIGHQ14442 188 aaPredicted RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 PALB2Q86YC2 1186 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 SAYSD1Q9NPB0 183 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 KYNUQ16719 465 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 SMYD4Q8IYR2 804 aaPredicted RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 TRPC4APQ8TEL6 797 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 OSBP2Q969R2 916 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 FBXO2Q9UK22 296 aaPredicted RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 SAC3D1A6NKF1 404 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 INAQ16352 499 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 ARMCX2Q7L311 632 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 CDKL3Q8IVW4 592 aaPredicted RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 DEPDC1BQ8WUY9 529 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 LRRC1Q9BTT6 524 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 TUFT1Q9NNX1 390 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 SLC5A4Q9NY91 659 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 NUB1Q9Y5A7 615 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 KIF1AQ12756 1690 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 SLCO1B7G3V0H7 640 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 KRT75O95678 551 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 TMEM253P0C7T8 217 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 BASP1P80723 227 aaKnown RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 RSPH3Q86UC2 560 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 DLG3Q92796 817 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 PPP2R3CQ969Q6 453 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 LRRC59Q96AG4 307 aaKnown RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 AS3MTQ9HBK9 375 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 NRBP2Q9NSY0 501 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 PCDHB4Q9Y5E5 795 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 DRG2P55039 364 aaKnown RBP9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 DAGLBQ8NCG7 672 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 DDHD1Q8NEL9 900 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 HDAC11Q96DB2 347 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 ETAA1Q9NY74 926 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 ENOPH1Q9UHY7 261 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 COMMD3-BMI1R4GMX3 469 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 VPS41P49754 854 aa9.33□□□□□ -0.92
SHROOM4-202ENST00000376020 GRM4Q14833 912 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms