RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TAF4BQ92750 862 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 WDR81Q562E7 1941 aa15.11■□□□□ 0.01
MSH5-202ENST00000375740 ATP2A1O14983 1001 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 KIF4AO95239 1232 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 TNFAIP3P21580 790 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 SMTNP53814 917 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 ACTN3Q08043 901 aaPredicted RBP15.1■□□□□ 0.01
MSH5-202ENST00000375740 CETN1Q12798 172 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 BSNDQ8WZ55 320 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 ACAD9Q9H845 621 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 KCNG1Q9UIX4 513 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 ATP8B3O60423 1300 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 DOCK5Q9H7D0 1870 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 A0A0A6YYK5 440 aaPredicted RBP15.1■□□□□ 0.01
MSH5-202ENST00000375740 KCNK3O14649 394 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 MEFVO15553 781 aaPredicted RBP15.1■□□□□ 0.01
MSH5-202ENST00000375740 ADSSP30520 456 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 EPC2Q52LR7 807 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 C8orf74Q6P047 294 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 SLC17A8Q8NDX2 589 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 KMT5AQ9NQR1 393 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 HOXC10Q9NYD6 342 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 EXOC7Q9UPT5 735 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 DAAM1Q9Y4D1 1078 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 FAM170AA1A519 330 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 MAPK13O15264 365 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 P4HA2O15460 535 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 ADRB2P07550 413 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 PSAPP07602 524 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 DMP1Q13316 513 aaPredicted RBP15.1■□□□□ 0.01
MSH5-202ENST00000375740 KIF22Q14807 665 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 LMBR1Q8WVP7 490 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 ATP6V0A1Q93050 837 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 TMEM117Q9H0C3 514 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 JPH1Q9HDC5 661 aaPredicted RBP15.1■□□□□ 0.01
MSH5-202ENST00000375740 STIM2Q9P246 746 aa15.1■□□□□ 0.01
MSH5-202ENST00000375740 SSC5DA1L4H1 1573 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 DENND3A2RUS2 1198 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 SPDYE16A6NNV3 312 aaPredicted RBP15.09■□□□□ 0.01
MSH5-202ENST00000375740 KIF1CO43896 1103 aaKnown RBP15.09■□□□□ 0.01
MSH5-202ENST00000375740 KRT14P02533 472 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 RFX1P22670 979 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 CNGA1P29973 690 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 GUCY1A3Q02108 690 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 GLE1Q53GS7 698 aaKnown RBP15.09■□□□□ 0.01
MSH5-202ENST00000375740 SLFN11Q7Z7L1 901 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 CCDC125Q86Z20 511 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 CBWD2Q8IUF1 395 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 FMNL3Q8IVF7 1028 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 RUBCNQ92622 972 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 SAAL1Q96ER3 474 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 NTPCRQ9BSD7 190 aaKnown RBP15.09■□□□□ 0.01
MSH5-202ENST00000375740 SEPT11Q9NVA2 429 aaKnown RBP15.09■□□□□ 0.01
MSH5-202ENST00000375740 SLC9A2Q9UBY0 812 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 USP2O75604 605 aaPredicted RBP15.09■□□□□ 0.01
MSH5-202ENST00000375740 FSBPO95073 299 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 SEC24CP53992 1094 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 ACTR2P61160 394 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 NOL9Q5SY16 702 aaKnown RBP15.09■□□□□ 0.01
MSH5-202ENST00000375740 DLK2Q6UY11 383 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 KIFAP3Q92845 792 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 TAS2R14Q9NYV8 317 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 STXBP5LQ9Y2K9 1186 aa15.09■□□□□ 0.01
MSH5-202ENST00000375740 POLR2AP24928 1970 aaKnown RBP15.08■□□□□ 0.01
MSH5-202ENST00000375740 SPATA31C2B4DYI2 1134 aa15.08■□□□□ 0
MSH5-202ENST00000375740 CES2O00748 559 aa15.08■□□□□ 0
MSH5-202ENST00000375740 TMEM253P0C7T8 217 aa15.08■□□□□ 0
MSH5-202ENST00000375740 ABCB4P21439 1286 aa15.08■□□□□ 0
MSH5-202ENST00000375740 SNRNP35Q16560 246 aaKnown RBP15.08■□□□□ 0
MSH5-202ENST00000375740 SUPT20HL1Q3ZLR7 823 aa15.08■□□□□ 0
MSH5-202ENST00000375740 PEX26Q7Z412 305 aa15.08■□□□□ 0
MSH5-202ENST00000375740 DAAM2Q86T65 1068 aa15.08■□□□□ 0
MSH5-202ENST00000375740 PALB2Q86YC2 1186 aa15.08■□□□□ 0
MSH5-202ENST00000375740 MAP4K3Q8IVH8 894 aa15.08■□□□□ 0
MSH5-202ENST00000375740 CCDC60Q8IWA6 550 aaPredicted RBP15.08■□□□□ 0
MSH5-202ENST00000375740 USP38Q8NB14 1042 aa15.08■□□□□ 0
MSH5-202ENST00000375740 GIMAP7Q8NHV1 300 aa15.08■□□□□ 0
MSH5-202ENST00000375740 SLC35G2Q8TBE7 412 aa15.08■□□□□ 0
MSH5-202ENST00000375740 PBKQ96KB5 322 aa15.08■□□□□ 0
MSH5-202ENST00000375740 KRT12Q99456 494 aa15.08■□□□□ 0
MSH5-202ENST00000375740 AGPAT1Q99943 283 aa15.08■□□□□ 0
MSH5-202ENST00000375740 OSGEPQ9NPF4 335 aa15.08■□□□□ 0
MSH5-202ENST00000375740 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.08■□□□□ 09e-7■■■■■ 47
MSH5-202ENST00000375740 PFASO15067 1338 aa15.08■□□□□ 0
MSH5-202ENST00000375740 NFASCO94856 1347 aa15.08■□□□□ 0
MSH5-202ENST00000375740 DKC1O60832 514 aaKnown RBP eCLIP15.08■□□□□ 0
MSH5-202ENST00000375740 MXI1P50539 228 aa15.08■□□□□ 0
MSH5-202ENST00000375740 SP2Q02086 613 aa15.08■□□□□ 0
MSH5-202ENST00000375740 MAP2K1Q02750 393 aaPredicted RBP15.08■□□□□ 0
MSH5-202ENST00000375740 ABHD15Q6UXT9 468 aa15.08■□□□□ 0
MSH5-202ENST00000375740 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.08■□□□□ 0
MSH5-202ENST00000375740 SPIRE2Q8WWL2 714 aa15.08■□□□□ 0
MSH5-202ENST00000375740 KAT5Q92993 513 aa15.08■□□□□ 0
MSH5-202ENST00000375740 CCDC127Q96BQ5 260 aa15.08■□□□□ 0
MSH5-202ENST00000375740 HVCN1Q96D96 273 aa15.08■□□□□ 0
MSH5-202ENST00000375740 CDHR1Q96JP9 859 aa15.08■□□□□ 0
MSH5-202ENST00000375740 RNPC3Q96LT9 517 aaKnown RBP15.08■□□□□ 0
MSH5-202ENST00000375740 CENPHQ9H3R5 247 aa15.08■□□□□ 0
MSH5-202ENST00000375740 PDLIM7Q9NR12 457 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms