RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 KRT10P13645 584 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 MXI1P50539 228 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 SEPT7Q16181 437 aaKnown RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 SLC10A5Q5PT55 438 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 MIER3Q7Z3K6 550 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 ANKMY2Q8IV38 441 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 ZDHHC14Q8IZN3 488 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 ATP8B4Q8TF62 1192 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 LRRN4Q8WUT4 740 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 KAT6AQ92794 2004 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 TAOK3Q9H2K8 898 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 METTL14Q9HCE5 456 aaKnown RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
MCF2L-202ENST00000375597 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
MCF2L-202ENST00000375597 PDXKO00764 312 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 BCRP11274 1271 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 GCFC2P16383 781 aaKnown RBP12.65□□□□□ -0.38
MCF2L-202ENST00000375597 ZNF131P52739 623 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 SMTNP53814 917 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 OVGP1Q12889 678 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 NBPF20Q3BBV1 942 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 XKR9Q5GH70 373 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 PADI6Q6TGC4 694 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 ZNF365Q70YC5 407 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 TATDN2Q93075 761 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 PCDHB18PQ96TA0 734 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 SWAP70Q9UH65 585 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 ECEL1O95672 775 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 ITIH3Q06033 890 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 ATP13A4Q4VNC1 1196 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 RPAINQ86UA6 219 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 FAM228AQ86W67 206 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 SUGP1Q8IWZ8 645 aaKnown RBP12.65□□□□□ -0.38
MCF2L-202ENST00000375597 AGBL1Q96MI9 1066 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 TGS1Q96RS0 853 aaKnown RBP12.65□□□□□ -0.38
MCF2L-202ENST00000375597 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 TMEM117Q9H0C3 514 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 PABPC3Q9H361 631 aaKnown RBP12.65□□□□□ -0.38
MCF2L-202ENST00000375597 CDC42EP4Q9H3Q1 356 aaKnown RBP12.65□□□□□ -0.38
MCF2L-202ENST00000375597 SUCLA2Q9P2R7 463 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-202ENST00000375597 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
MCF2L-202ENST00000375597 PIK3R2O00459 728 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 SLITRK3O94933 977 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 CYP3A4P08684 503 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 ETS1P14921 441 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 TARSP26639 723 aaKnown RBP12.65□□□□□ -0.39
MCF2L-202ENST00000375597 MAPK4P31152 587 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 GCKP35557 465 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 PRKG1Q13976 671 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 TRPM8Q7Z2W7 1104 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 ETNK1Q9HBU6 452 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 SLCO1B3Q9NPD5 702 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 PRR12Q9ULL5 1215 aa12.65□□□□□ -0.39
MCF2L-202ENST00000375597 ESYT2A0FGR8 921 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 CPP00450 1065 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 TNNI1P19237 187 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 ISLR2Q6UXK2 745 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 NOP9Q86U38 636 aaKnown RBP12.64□□□□□ -0.39
MCF2L-202ENST00000375597 WDR11Q9BZH6 1224 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.64□□□□□ -0.393e-7■■■■□ 22.5
MCF2L-202ENST00000375597 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 SAE1Q9UBE0 346 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-202ENST00000375597 KIAA0391O15091 583 aaKnown RBP12.64□□□□□ -0.39
MCF2L-202ENST00000375597 CTNNA2P26232 953 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 CHRNA5P30532 468 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 ELF3P78545 371 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-202ENST00000375597 BFSP1Q12934 665 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 BYSLQ13895 437 aaKnown RBP12.64□□□□□ -0.39
MCF2L-202ENST00000375597 CCDC33Q8N5R6 958 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 AGAP11Q8TF27 550 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 TBC1D22AQ8WUA7 517 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 POMGNT1Q8WZA1 660 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 STK33Q9BYT3 514 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 FAM129AQ9BZQ8 928 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 UNC45AQ9H3U1 944 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 USP21Q9UK80 565 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 ROBO1Q9Y6N7 1651 aa12.64□□□□□ -0.39
MCF2L-202ENST00000375597 IPO5O00410 1097 aaKnown RBP12.63□□□□□ -0.39
MCF2L-202ENST00000375597 ALDH5A1P51649 535 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-202ENST00000375597 VAMP7P51809 220 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 AOC3Q16853 763 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 INTS8Q75QN2 995 aaKnown RBP12.63□□□□□ -0.39
MCF2L-202ENST00000375597 EDEM3Q9BZQ6 932 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 SLITRK6Q9H5Y7 841 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 KCNMB3Q9NPA1 279 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 ITGB4P16144 1822 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 DDX3YO15523 660 aaKnown RBP12.63□□□□□ -0.39
MCF2L-202ENST00000375597 ANP32DO95626 131 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 ITGA8P53708 1063 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 GPC5P78333 572 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 APOBEC3HQ6NTF7 200 aaKnown RBP12.63□□□□□ -0.39
MCF2L-202ENST00000375597 ETNPPLQ8TBG4 499 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 SYN2Q92777 582 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-202ENST00000375597 PPP1R16BQ96T49 567 aa12.63□□□□□ -0.39
MCF2L-202ENST00000375597 NSRP1Q9H0G5 558 aaKnown RBP12.63□□□□□ -0.39
MCF2L-202ENST00000375597 R3HDM2Q9Y2K5 976 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms