RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TLE6Q9H808 572 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 DACH1Q9UI36 760 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SAMM50Q9Y512 469 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 SQORQ9Y6N5 450 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 EVPLQ92817 2033 aa12.09□□□□□ -0.47
HLA-DQA1-202ENST00000374949 A0A087WWV3 80 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SMIM35A0A1B0GVV1 85 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PVALEFA0A1B0GWK0 134 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 MYMKA6NI61 221 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TBKBP1A7MCY6 615 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 WDR64B1ANS9 1081 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SSBP05455 408 aaKnown RBP eCLIP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 STAT5BP51692 787 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PTPN5P54829 565 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 VCPP55072 806 aaKnown RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TCF15Q12870 199 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KCNB1Q14721 858 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CBX2Q14781 532 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CT47A1Q5JQC4 288 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 C11orf57Q6ZUT1 292 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 BMP8AQ7Z5Y6 402 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SYT2Q8N9I0 419 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 BPIFA3Q9BQP9 254 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PHF7Q9BWX1 381 aaPredicted RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TRIM9Q9C026 710 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ZSWIM4Q9H7M6 989 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CBX8Q9HC52 389 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ERVK-5Q9HDB9 667 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TLR9Q9NR96 1032 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 NOC2LQ9Y3T9 749 aaKnown RBP12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PCDHA10Q9Y5I2 948 aa12.08□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DENND3A2RUS2 1198 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KLRC4O43908 158 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DKC1O60832 514 aaKnown RBP eCLIP12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FGF18O76093 207 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CCNE2O96020 404 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PSAPP07602 524 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FGFR1P11362 822 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 XRCC6P12956 609 aaKnown RBP eCLIP12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SP100P23497 879 aaPredicted RBP12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 QARSP47897 775 aaKnown RBP12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ERVFC1P60507 584 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ASIC1P78348 528 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DPCR1Q3MIW9 517 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FAM102BQ5T8I3 360 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PLPPR4Q7Z2D5 763 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 THNSL1Q8IYQ7 743 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FBXL6Q8N531 539 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 COLGALT1Q8NBJ5 622 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ADAM2Q99965 735 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 APOL5Q9BWW9 433 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FAM86C1Q9NVL1 165 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PCDHB7Q9Y5E2 793 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PCDHB12Q9Y5F1 795 aa12.07□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 BECN2A8MW95 431 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 BACH1O14867 736 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 RPS6KA5O75582 802 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 RHOBTB3O94955 611 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 LYPLA2O95372 231 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KRT18P05783 430 aaKnown RBP12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 BMP6P22004 513 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KLRC1P26715 233 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SLC12A3P55017 1021 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PSMC5P62195 406 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 UBE3AQ05086 875 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SIGLEC14Q08ET2 396 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DUSP6Q16828 381 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ZNF658Q5TYW1 1059 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PLPP4Q5VZY2 271 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 MIS18BP1Q6P0N0 1132 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 LLGL2Q6P1M3 1020 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ABHD15Q6UXT9 468 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 UNC13DQ70J99 1090 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DYMQ7RTS9 669 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CCDC60Q8IWA6 550 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PIGOQ8TEQ8 1089 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ATP8B4Q8TF62 1192 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 SUSD6Q92537 303 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 DDX12PQ92771 950 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ASIC4Q96FT7 647 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 LXNQ9BS40 222 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 TYW1Q9NV66 732 aaKnown RBP12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ZFHX2Q9C0A1 2572 aaPredicted RBP12.06□□□□□ -0.48
HLA-DQA1-202ENST00000374949 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 C9IYK1 514 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 GOLGA6L19H0YKK7 550 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 FSCN2O14926 492 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ATG7O95352 703 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 ATF7P17544 494 aaPredicted RBP12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 CYP11B2P19099 503 aa12.05□□□□□ -0.48
HLA-DQA1-202ENST00000374949 PSMD2Q13200 908 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms