RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 RNF39Q9H2S5 420 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 PDZD7Q9H5P4 517 aa23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TYW1Q9NV66 732 aaKnown RBP23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CIZ1Q9ULV3 898 aaPredicted RBP23.1■■□□□ 1.29
MAP1LC3A-202ENST00000374837 PHLPP2Q6ZVD8 1323 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 N4BP3O15049 544 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 OFD1O75665 1012 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 MAPTP10636 758 aaKnown RBP23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CMA1P23946 247 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 NCKAP1LP55160 1127 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 EEF1DP3Q658K8 133 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 LRRC55Q6ZSA7 311 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 STAMQ92783 540 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 GAS2L1Q99501 681 aaPredicted RBP23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CUEDC2Q9H467 287 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 HCSTQ9UBK5 93 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 KCNH3Q9ULD8 1083 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 HES2Q9Y543 173 aa23.09■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TRAK2O60296 914 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 LPXNO60711 386 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ITGA4P13612 1032 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CTNNB1P35222 781 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ATF7IP2Q5U623 682 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 HAUS6Q7Z4H7 955 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 ACO2Q99798 780 aaKnown RBP23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 TRIM6Q9C030 488 aaPredicted RBP23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 CWH43Q9H720 699 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 KBTBD4Q9NVX7 518 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 RWDD3Q9Y3V2 267 aa23.08■■□□□ 1.29
MAP1LC3A-202ENST00000374837 A0A1B0GVL5 298 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 RB1P06400 928 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 FOSL2P15408 326 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 IGFBP4P22692 258 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GLB1LQ6UWU2 654 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GDPD5Q8WTR4 605 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 KCNN1Q92952 543 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 FIZ1Q96SL8 496 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TARS2Q9BW92 718 aaKnown RBP23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 APOL6Q9BWW8 343 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 MRPL4Q9BYD3 311 aaKnown RBP23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TNMDQ9H2S6 317 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 NXF3Q9H4D5 531 aaKnown RBP23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 RSAD1Q9HA92 442 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TNFSF13BQ9Y275 285 aa23.07■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SPTBN5Q9NRC6 3674 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 C5orf67F2Z3F1 127 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 H0YCG3 227 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 H3BNC9 293 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PFKFB1P16118 471 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 STRN3Q13033 797 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GPM6BQ13491 265 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 NOMO2Q5JPE7 1267 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SPOUT1Q5T280 376 aaKnown RBP23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SFR1Q86XK3 245 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 LRRC43Q8N309 656 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 LRRC27Q9C0I9 530 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 INPP5FQ9Y2H2 1132 aa23.06■■□□□ 1.28
MAP1LC3A-202ENST00000374837 K7ENM7 598 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 NMT1P30419 496 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 AFF1P51825 1210 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TPRNQ4KMQ1 711 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 FAM178BQ8IXR5 827 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PYM1Q9BRP8 204 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ADPGKQ9BRR6 497 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PLVAPQ9BX97 442 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 MRPL9Q9BYD2 267 aaKnown RBP23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PTPRHQ9HD43 1115 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 UBN1Q9NPG3 1134 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 HPSEQ9Y251 543 aa23.05■■□□□ 1.28
MAP1LC3A-202ENST00000374837 FAM237AA0A1B0GTK4 181 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 A0A1W2PQ27 194 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 A0A1W2PQ64 194 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 A0A1W2PQD8 194 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 IDEP14735 1019 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GAP43P17677 238 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 POU3F3P20264 500 aaPredicted RBP23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 AKAP5P24588 427 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 AMPD3Q01432 767 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 HACE1Q8IYU2 909 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 RSPH1Q8WYR4 309 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GAD1Q99259 594 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TRIM9Q9C026 710 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 MAGEF1Q9HAY2 307 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 AAASQ9NRG9 546 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PANK4Q9NVE7 773 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TBC1D13Q9NVG8 400 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 CHMP5Q9NZZ3 219 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 PARP2Q9UGN5 583 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SERTAD1Q9UHV2 236 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TBX20Q9UMR3 447 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GIT1Q9Y2X7 761 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 TTC28Q96AY4 2481 aa23.04■■□□□ 1.28
MAP1LC3A-202ENST00000374837 FRMD3A2A2Y4 597 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 SCP2P22307 547 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 GTF2BQ00403 316 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 DCAF4L1Q3SXM0 396 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 HERC4Q5GLZ8 1057 aaPredicted RBP23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 ZNF720Q7Z2F6 126 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 COLGALT1Q8NBJ5 622 aa23.03■■□□□ 1.28
MAP1LC3A-202ENST00000374837 URGCPQ8TCY9 931 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms