RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 SRGNP10124 158 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 VPS39Q96JC1 886 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 APOL6Q9BWW8 343 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 MAN1A2O60476 641 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 NDUFB10O96000 172 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 SFNP31947 248 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 KIF19Q2TAC6 998 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 ZC4H2Q9NQZ6 224 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 TYW5A2RUC4 315 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 LRRC53A6NM62 1247 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 CD58P19256 250 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 RGS9BPQ6ZS82 235 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 ACAD11Q709F0 780 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 PROM2Q8N271 834 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 FAM167BQ9BTA0 163 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 SMYD3Q9H7B4 428 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 ACAD9Q9H845 621 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 SLC4A7Q9Y6M7 1214 aa13.07□□□□□ -0.32
NPLOC4-202ENST00000374747 ZBTB24O43167 697 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 SURF1Q15526 300 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 LDHDQ86WU2 507 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 FAM167AQ96KS9 214 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 OSBPL1AQ9BXW6 950 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ECT2Q9H8V3 914 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ETNK1Q9HBU6 452 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 LRRC4Q9HBW1 653 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 DNAJC12Q9UKB3 198 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 MRFAP1Q9Y605 127 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ARHGAP10A1A4S6 786 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 KPNA7A9QM74 516 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 KIF1CO43896 1103 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 YWHAHQ04917 246 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 CAPRIN2Q6IMN6 1127 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ING2Q9H160 280 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ANAPC7Q9UJX3 599 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ADGRG1Q9Y653 693 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ARHGDIAP52565 204 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ERICH1Q86X53 443 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 TTC13Q8NBP0 860 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 TGS1Q96RS0 853 aaKnown RBP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 NDE1Q9NXR1 346 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 SLC12A6Q9UHW9 1150 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ZRANB2O95218 330 aaKnown RBP eCLIP13.06□□□□□ -0.325e-6■■■□□ 18.7
NPLOC4-202ENST00000374747 PSMA2P25787 234 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ANO5Q75V66 913 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 RPAP3Q9H6T3 665 aaPredicted RBP13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 ZWILCHQ9H900 591 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 CAMTA1Q9Y6Y1 1673 aa13.06□□□□□ -0.32
NPLOC4-202ENST00000374747 TDP2O95551 362 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 PDHBP11177 359 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 BRAFP15056 766 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 RYBPQ8N488 228 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 C7orf31Q8N865 590 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 RBM46Q8TBY0 533 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 TRIM33Q9UPN9 1127 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 SNX5Q9Y5X3 404 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 USP27XA6NNY8 438 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 SLC4A1P02730 911 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 STAT3P40763 770 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 PDIA5Q14554 519 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 COG1Q8WTW3 980 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 ZBTB18Q99592 522 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 KLC4Q9NSK0 619 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 CNOT8Q9UFF9 292 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 LCMT1Q9UIC8 334 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 FBXO2Q9UK22 296 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 SYCE1LA8MT33 242 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 C19orf81C9J6K1 198 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 P4HBP07237 508 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 GPC5P78333 572 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 ZBTB41Q5SVQ8 909 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 NFRKBQ6P4R8 1299 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 PIGOQ8TEQ8 1089 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 XPAP23025 273 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 ARFIP2P53365 341 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 RAD23BP54727 409 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 GFPT1Q06210 699 aaPredicted RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 MKRN3Q13064 507 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 FASTKD5Q7L8L6 764 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 METTL23Q86XA0 190 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 SIX6OS1Q8N1H7 587 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 BTBD6Q96KE9 485 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 TARSL2A2RTX5 802 aaKnown RBP13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 H3BRJ5 948 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 CHRNA3P32297 505 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 TRIM59Q8IWR1 403 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 HSPH1Q92598 858 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 FAM161BQ96MY7 647 aa13.05□□□□□ -0.32
NPLOC4-202ENST00000374747 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.05□□□□□ -0.329e-7■■□□□ 13.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms