RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 TOGARAM2Q6ZUX3 1019 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 CHD1LQ86WJ1 897 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 NOSTRINQ8IVI9 506 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 CCDC127Q96BQ5 260 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 ARL5BQ96KC2 179 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 TPK1Q9H3S4 243 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 TMEM206Q9H813 350 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 RPH3AQ9Y2J0 694 aaPredicted RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 CD2APQ9Y5K6 639 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 FAM83GA6ND36 823 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 TNFRSF10AO00220 468 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 ST8SIA5O15466 376 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SMPD2O60906 423 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SMIM24O75264 130 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 KCNH1O95259 989 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 LSP1P33241 339 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 CCT6AP40227 531 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 LIFRP42702 1097 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 PSMC4P43686 418 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 BCAMP50895 628 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 YBEYP58557 167 aaPredicted RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 OTUD4Q01804 1114 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 DYNC1I2Q13409 638 aaKnown RBP8.51□□□□□ -1.05
USP48-203ENST00000374732 CUL2Q13617 745 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SNCBQ16143 134 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 MOGQ16653 247 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 FBXO43Q4G163 708 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SNX30Q5VWJ9 437 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 DBX2Q6ZNG2 339 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 RGS9BPQ6ZS82 235 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 ZDHHC17Q8IUH5 632 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 LRRC34Q8IZ02 419 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 PJA1Q8NG27 643 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 ZNF408Q9H9D4 720 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 SPTLC3Q9NUV7 552 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 EPS15L1Q9UBC2 864 aa8.51□□□□□ -1.05
USP48-203ENST00000374732 A8MX80 341 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 THAP12O43422 761 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 HLA-DRAP01903 254 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 CFL1P23528 166 aaKnown RBP8.5□□□□□ -1.05
USP48-203ENST00000374732 PCP4P48539 62 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 FNTAP49354 379 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 DIO1P49895 249 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 PTPN5P54829 565 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 NLRP6P59044 892 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 RPP38P78345 283 aaKnown RBP8.5□□□□□ -1.05
USP48-203ENST00000374732 CTDSPL2Q05D32 466 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 SLC44A4Q53GD3 710 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 FBXO38Q6PIJ6 1188 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 REXO1L1PQ8IX06 675 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 CCDC33Q8N5R6 958 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 ANKRD53Q8N9V6 530 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 RUFY2Q8WXA3 655 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 ZNF653Q96CK0 615 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 GBP3Q9H0R5 595 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 ATXN10Q9UBB4 475 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 DNAI1Q9UI46 699 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 PCDHB3Q9Y5E6 796 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 CACNA1FO60840 1977 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 C9IYK1 514 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 TSC22D2O75157 780 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 PSMC2P35998 433 aaKnown RBP8.5□□□□□ -1.05
USP48-203ENST00000374732 ARHGAP4P98171 946 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 CUL1Q13616 776 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 ARHGAP29Q52LW3 1261 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 BMP2KLQ5H9B9 411 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 ALDH16A1Q8IZ83 802 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 C17orf53Q8N3J3 647 aaPredicted RBP8.5□□□□□ -1.05
USP48-203ENST00000374732 USHBP1Q8N6Y0 703 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 LZICQ8WZA0 190 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 TMIGD2Q96BF3 282 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 STRBPQ96SI9 672 aaKnown RBP8.5□□□□□ -1.05
USP48-203ENST00000374732 CHCHD6Q9BRQ6 235 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 CYP4F12Q9HCS2 524 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 HPF1Q9NWY4 346 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 HACD3Q9P035 362 aa8.5□□□□□ -1.05
USP48-203ENST00000374732 PCP4L1A6NKN8 68 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 CBFA2T3O75081 653 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 TRPA1O75762 1119 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 PDHBP11177 359 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 RFC4P35249 363 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 RPIAP49247 311 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 AMPHP49418 695 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 GNAQP50148 359 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 MAP3K7CLP57077 242 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 MPP1Q00013 466 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 PRKCEQ02156 737 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 ZBTB16Q05516 673 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 APOBRQ0VD83 1088 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 TPGS2Q68CL5 300 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 AGMOQ6ZNB7 445 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 RALYLQ86SE5 291 aaKnown RBP8.49□□□□□ -1.05
USP48-203ENST00000374732 SHCBP1Q8NEM2 672 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 RUBCNQ92622 972 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 HOOK2Q96ED9 719 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 VCPIP1Q96JH7 1222 aa8.49□□□□□ -1.05
USP48-203ENST00000374732 TSEN34Q9BSV6 310 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms