RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 TRMT10CQ7L0Y3 403 aaKnown RBP13.84□□□□□ -0.19
PRPF4-201ENST00000374198 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 LZICQ8WZA0 190 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 METTL5Q9NRN9 209 aaKnown RBP13.84□□□□□ -0.19
PRPF4-201ENST00000374198 NKIRAS1Q9NYS0 192 aa13.84□□□□□ -0.19
PRPF4-201ENST00000374198 POTEFA5A3E0 1075 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 CAPN9O14815 690 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 PFDN1O60925 122 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 STARD3NLO95772 234 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 SPATA31D3P0C874 917 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 ZCCHC18P0CG32 403 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 POTEIP0CG38 1075 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 POTEJP0CG39 1038 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 RFC4P35249 363 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 SH3BGRP55822 239 aaPredicted RBP13.83□□□□□ -0.19
PRPF4-201ENST00000374198 RASGRF1Q13972 1273 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 RRP1BQ14684 758 aaKnown RBP13.83□□□□□ -0.19
PRPF4-201ENST00000374198 CLUL1Q15846 466 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 POTEEQ6S8J3 1075 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 SPATA31D4Q6ZUB0 917 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 HIC2Q96JB3 615 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 METTL14Q9HCE5 456 aaKnown RBP13.83□□□□□ -0.19
PRPF4-201ENST00000374198 BLOC1S4Q9NUP1 217 aa13.83□□□□□ -0.19
PRPF4-201ENST00000374198 BAZ2BQ9UIF8 2168 aaKnown RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 MAP3K7O43318 606 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 PHF2O75151 1096 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 KRT36O76013 467 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CCDC166P0CW27 439 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CYP19A1P11511 503 aaPredicted RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 PLCG2P16885 1265 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 ANXA13P27216 316 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CHRNA3P32297 505 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 ZNF211Q13398 564 aaPredicted RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 MOGSQ13724 837 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 DSTYKQ6XUX3 929 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CCDC25Q86WR0 208 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 MYOCDQ8IZQ8 938 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 ART4Q93070 314 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CEP63Q96MT8 703 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 ZNF184Q99676 751 aaPredicted RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CENPKQ9BS16 269 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 DDX43Q9NXZ2 648 aaKnown RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 COL5A3P25940 1745 aaPredicted RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 TBX10O75333 385 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 TMCC1O94876 653 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 ACTN1P12814 892 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 ALDH1B1P30837 517 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 HOXA7P31268 230 aaPredicted RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 PRKCIP41743 596 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 EPS15P42566 896 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 TECP42680 631 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 RTP1P59025 263 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 TMEM62Q0P6H9 643 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CERKLQ49MI3 558 aaPredicted RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 SPDYAQ5MJ70 313 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 PPP1R21Q6ZMI0 780 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 MIS12Q9H081 205 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 TAOK3Q9H2K8 898 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CDC42EP4Q9H3Q1 356 aaKnown RBP13.83□□□□□ -0.2
PRPF4-201ENST00000374198 OSGEPQ9NPF4 335 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 RHBDL2Q9NX52 303 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 CIDEBQ9UHD4 219 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 PCYOX1Q9UHG3 505 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 LNPEPQ9UIQ6 1025 aa13.83□□□□□ -0.2
PRPF4-201ENST00000374198 PASKQ96RG2 1323 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 ACSL3O95573 720 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 ADRA2BP18089 450 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 MARSP56192 900 aaKnown RBP13.82□□□□□ -0.2
PRPF4-201ENST00000374198 WDR72Q3MJ13 1102 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 Q4G0T1 1027 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 SH2D4BQ5SQS7 431 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
PRPF4-201ENST00000374198 NELFCDQ8IXH7 590 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 ARHGEF1Q92888 912 aaKnown RBP13.82□□□□□ -0.2
PRPF4-201ENST00000374198 MIPEPQ99797 713 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 GREM2Q9H772 168 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 DDX3XO00571 662 aaKnown RBP eCLIP13.82□□□□□ -0.23e-8■■■■■ 39.4
PRPF4-201ENST00000374198 HNRNPRO43390 633 aaKnown RBP13.82□□□□□ -0.2
PRPF4-201ENST00000374198 PSMG1O95456 288 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 ETS2P15036 469 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 UCHL3P15374 230 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 CCNFP41002 786 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 IL9RQ01113 521 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 CDR2Q01850 454 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 ACSBG2Q5FVE4 666 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 MIGA2Q7L4E1 593 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 VPS36Q86VN1 386 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 KBTBD2Q8IY47 623 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 SGIP1Q9BQI5 828 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 ASCC2Q9H1I8 757 aaPredicted RBP13.82□□□□□ -0.2
PRPF4-201ENST00000374198 PHTF1Q9UMS5 762 aa13.82□□□□□ -0.2
PRPF4-201ENST00000374198 UBR2Q8IWV8 1755 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 MAGEB2O15479 319 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 TTLL1O95922 423 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 VCAM1P19320 739 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 CDK7P50613 346 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 GALCP54803 685 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 PPATQ06203 517 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 GRB10Q13322 594 aa13.81□□□□□ -0.2
PRPF4-201ENST00000374198 DPY19L2P1Q6NXN4 242 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms