RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 ZNF662Q6ZS27 426 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 LRRC55Q6ZSA7 311 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 ANO5Q75V66 913 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 PACS2Q86VP3 889 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 CCDC170Q8IYT3 715 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 GOLGA1Q92805 767 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 EEF2KMTQ96G04 330 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 KATNAL1Q9BW62 490 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 NDST4Q9H3R1 872 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 SEPT9Q9UHD8 586 aaPredicted RBP15.57■□□□□ 0.08
HMGA1-203ENST00000374116 CDC23Q9UJX2 597 aa15.57■□□□□ 0.08
HMGA1-203ENST00000374116 ARVCFO00192 962 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 B4GALT4O60513 344 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 CYLC1P35663 651 aaPredicted RBP15.56■□□□□ 0.08
HMGA1-203ENST00000374116 RGS19P49795 217 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 PPFIA1Q13136 1202 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 LONRF2Q1L5Z9 754 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 GPBP1Q86WP2 473 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 RDM1Q8NG50 284 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 LMBR1Q8WVP7 490 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 ATP6V0A1Q93050 837 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 SECISBP2LQ93073 1101 aaKnown RBP15.56■□□□□ 0.08
HMGA1-203ENST00000374116 PARD6BQ9BYG5 372 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 HAUS4Q9H6D7 363 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 AGPAT5Q9NUQ2 364 aa15.56■□□□□ 0.08
HMGA1-203ENST00000374116 REXO2Q9Y3B8 237 aaKnown RBP15.56■□□□□ 0.08
HMGA1-203ENST00000374116 ZBTB42B2RXF5 422 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 CLGNO14967 610 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 TREHO43280 583 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 OATP04181 439 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 SSBP05455 408 aaKnown RBP eCLIP15.55■□□□□ 0.08
HMGA1-203ENST00000374116 RTP1P59025 263 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 MTERF2Q49AM1 385 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 SLC35F6Q8N357 371 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 CEP112Q8N8E3 955 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 NAPGQ99747 312 aaPredicted RBP15.55■□□□□ 0.08
HMGA1-203ENST00000374116 POLD4Q9HCU8 107 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 RAB21Q9UL25 225 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 DNM3Q9UQ16 869 aa15.55■□□□□ 0.08
HMGA1-203ENST00000374116 NPHP3-ACAD11A0A0J9YXS1 232 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 EIF3CLB5ME19 914 aaKnown RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 CYP2C9P11712 490 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 YWHABP31946 246 aaKnown RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 KLK7P49862 253 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 CDK7P50613 346 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 FKBP3Q00688 224 aaKnown RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 TLE2Q04725 743 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 GIT2Q14161 759 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 GRIK4Q16099 956 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 MARCH8Q5T0T0 291 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 SRGAP1Q7Z6B7 1085 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 ATP8B4Q8TF62 1192 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 CEP63Q96MT8 703 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 EIF3CQ99613 913 aaKnown RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 FGFBP2Q9BYJ0 223 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 ZSWIM4Q9H7M6 989 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 TUFT1Q9NNX1 390 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 GTF2IRD1Q9UHL9 959 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 SIK3Q9Y2K2 1263 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 C17orf102A2RUQ5 167 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 IPO7O95373 1038 aaKnown RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 MUTP22033 750 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 HNRNPH3P31942 346 aaKnown RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 GSCP56915 257 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 PTGISQ16647 500 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 NFRKBQ6P4R8 1299 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 ZC3H3Q8IXZ2 948 aaKnown RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 EFCAB13Q8IY85 973 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 SLC43A3Q8NBI5 491 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 MSANTD4Q8NCY6 345 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 WNT8BQ93098 351 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 CEP89Q96ST8 783 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 NHEJ1Q9H9Q4 299 aaPredicted RBP15.54■□□□□ 0.08
HMGA1-203ENST00000374116 EVPLQ92817 2033 aa15.54■□□□□ 0.08
HMGA1-203ENST00000374116 TNRC18O15417 2968 aaPredicted RBP15.53■□□□□ 0.08
HMGA1-203ENST00000374116 HBP1O60381 514 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 EYA4O95677 639 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 GNA14O95837 355 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 ABL1P00519 1130 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 HDXQ7Z353 690 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 FAM126BQ8IXS8 530 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 C4orf19Q8IY42 314 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 EHBP1Q8NDI1 1231 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 SCFD1Q8WVM8 642 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 EDEM3Q9BZQ6 932 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 FAM107BQ9H098 131 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 KCTD10Q9H3F6 313 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 DEF6Q9H4E7 631 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 COL4A3BPQ9Y5P4 624 aa15.53■□□□□ 0.08
HMGA1-203ENST00000374116 SLC26A2P50443 739 aa15.52■□□□□ 0.08
HMGA1-203ENST00000374116 WHAMMP3Q1A5X7 153 aa15.52■□□□□ 0.08
HMGA1-203ENST00000374116 XKR9Q5GH70 373 aa15.52■□□□□ 0.08
HMGA1-203ENST00000374116 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
HMGA1-203ENST00000374116 HERC4Q5GLZ8 1057 aaPredicted RBP15.52■□□□□ 0.08
HMGA1-203ENST00000374116 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.08
HMGA1-203ENST00000374116 MMS22LQ6ZRQ5 1243 aa15.52■□□□□ 0.08
HMGA1-203ENST00000374116 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.08
HMGA1-203ENST00000374116 LRRC71Q8N4P6 559 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms