RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 KIF19Q2TAC6 998 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 LZICQ8WZA0 190 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 ELP3Q9H9T3 547 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 RRAGDQ9NQL2 400 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 NDE1Q9NXR1 346 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 PYCARDQ9ULZ3 195 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 DAGLAQ9Y4D2 1042 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 PDS5AQ29RF7 1337 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 EIF3DO15371 548 aaKnown RBP eCLIP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 ATP5HO75947 161 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 TMPRSS15P98073 1019 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 ATP2C1P98194 919 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 ROR1Q01973 937 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 TSGA10IPQ3SY00 556 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 RABL6Q3YEC7 729 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 APOBEC2Q9Y235 224 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 CDC27P30260 824 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 NOVA2Q9UNW9 492 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 PIN4Q9Y237 131 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 MED14O60244 1454 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 FAM102AQ5T9C2 384 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 RNF149Q8NC42 400 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 NSUN4Q96CB9 384 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 SPON2Q9BUD6 331 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 ABCF3Q9NUQ8 709 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 HEY1Q9Y5J3 304 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 RRN3P2A6NIE6 340 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 LRRC53A6NM62 1247 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 CREB3O43889 395 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 LARGE1O95461 756 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 YWHABP31946 246 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 ZNF543Q08ER8 600 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 MTMR2Q13614 643 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 DRAP1Q14919 205 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 SKIV2LQ15477 1246 aaKnown RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 HP1BP3Q5SSJ5 553 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 BARGINQ6ZT62 677 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 TEX2Q8IWB9 1127 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 RDM1Q8NG50 284 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 FOPNLQ96NB1 174 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 ABHD10Q9NUJ1 306 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 MTMR4Q9NYA4 1195 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 TBK1Q9UHD2 729 aa11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 FAF1Q9UNN5 650 aaPredicted RBP11.78□□□□□ -0.52
PHACTR4-202ENST00000373839 POTEFA5A3E0 1075 aa11.77□□□□□ -0.52
PHACTR4-202ENST00000373839 IL18RAPO95256 599 aa11.77□□□□□ -0.52
PHACTR4-202ENST00000373839 POTEIP0CG38 1075 aa11.77□□□□□ -0.52
PHACTR4-202ENST00000373839 POTEGQ6S5H5 508 aa11.77□□□□□ -0.52
PHACTR4-202ENST00000373839 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.52
PHACTR4-202ENST00000373839 SH3KBP1Q96B97 665 aa11.77□□□□□ -0.52
PHACTR4-202ENST00000373839 DNAJC17Q9NVM6 304 aaKnown RBP11.77□□□□□ -0.52
PHACTR4-202ENST00000373839 CXCR5P32302 372 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 MED15Q96RN5 788 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 TEKT2Q9UIF3 430 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 L3MBTL1Q9Y468 752 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 PALMO75781 387 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 SKIP12755 728 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ADORA2BP29275 332 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 HDLBPQ00341 1268 aaKnown RBP11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 GTF2H3Q13889 308 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ANO4Q32M45 955 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ACCSLQ4AC99 568 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ANGPTL8Q6UXH0 198 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ANKS3Q6ZW76 656 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ATP11CQ8NB49 1132 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 AGBL3Q8NEM8 1001 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 APPL2Q8NEU8 664 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 RFFLQ8WZ73 363 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 EXT2Q93063 718 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 AP1M1Q9BXS5 423 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 CCSER1Q9C0I3 900 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 VCPKMTQ9H867 229 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 IFT88Q13099 833 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 TRIM68Q6AZZ1 485 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 TTC30AQ86WT1 665 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 SYT2Q8N9I0 419 aaPredicted RBP11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 SCFD2Q8WU76 684 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 ANP32DO95626 131 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 LMNAP02545 664 aaKnown RBP11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 SLCO1A2P46721 670 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 NSUN2Q08J23 767 aaKnown RBP eCLIP11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 RASIP1Q5U651 963 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 STKLD1Q8NE28 680 aa11.77□□□□□ -0.53
PHACTR4-202ENST00000373839 GAS2O43903 313 aaKnown RBP11.76□□□□□ -0.53
PHACTR4-202ENST00000373839 PCSK1P29120 753 aa11.76□□□□□ -0.53
PHACTR4-202ENST00000373839 PRR5LQ6MZQ0 368 aa11.76□□□□□ -0.53
PHACTR4-202ENST00000373839 KRT35Q92764 455 aa11.76□□□□□ -0.53
PHACTR4-202ENST00000373839 DCUN1D1Q96GG9 259 aa11.76□□□□□ -0.53
PHACTR4-202ENST00000373839 MAP3K14Q99558 947 aa11.76□□□□□ -0.53
PHACTR4-202ENST00000373839 ASPSCR1Q9BZE9 553 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms