RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 U2AF1L4Q8WU68 220 aaKnown RBP21.23■□□□□ 0.99
HDAC1-201ENST00000373548 GPR20Q99678 358 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 EFCC1Q9HA90 598 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 TOPORSQ9NS56 1045 aaPredicted RBP21.23■□□□□ 0.99
HDAC1-201ENST00000373548 LRRIQ4A6NIV6 560 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 RHOXF2BP0C7M4 288 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 CCDC172P0C7W6 258 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 TCP1P17987 556 aaKnown RBP21.23■□□□□ 0.99
HDAC1-201ENST00000373548 LIG4P49917 911 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 HSDL1Q3SXM5 330 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 KRT39Q6A163 491 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 CCDC62Q6P9F0 684 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 TMCO3Q6UWJ1 677 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 GLYCTKQ8IVS8 523 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 CAGE1Q8TC20 777 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 SEMA4DQ92854 862 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 PNKPQ96T60 521 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 RHOXF2Q9BQY4 288 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 TMEM8AQ9HCN3 771 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 PNMA3Q9UL41 463 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 COQ4Q9Y3A0 265 aa21.23■□□□□ 0.99
HDAC1-201ENST00000373548 ZRANB2O95218 330 aaKnown RBP eCLIP21.22■□□□□ 0.99
HDAC1-201ENST00000373548 STRN3Q13033 797 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 DEPTORQ8TB45 409 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 RPGRIP1Q96KN7 1286 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 FAM213AQ9BRX8 229 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 AZI2Q9H6S1 392 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 GRID2IPA4D2P6 1211 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 SPDYE4A6NLX3 237 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 LGR5O75473 907 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 H2AFZP0C0S5 128 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 CC2D1AQ6P1N0 951 aaPredicted RBP21.22■□□□□ 0.99
HDAC1-201ENST00000373548 H2AFVQ71UI9 128 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 TRIM50Q86XT4 487 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 KAT5Q92993 513 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 VTI1AQ96AJ9 217 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 FAM167AQ96KS9 214 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 PLXNA1Q9UIW2 1896 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 RAB21Q9UL25 225 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 INTUQ9ULD6 942 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 STYXL1Q9Y6J8 313 aa21.22■□□□□ 0.99
HDAC1-201ENST00000373548 UNCXA6NJT0 531 aa21.21■□□□□ 0.99
HDAC1-201ENST00000373548 TULP1O00294 542 aaPredicted RBP21.21■□□□□ 0.99
HDAC1-201ENST00000373548 MAFO75444 373 aaPredicted RBP21.21■□□□□ 0.99
HDAC1-201ENST00000373548 PIGRP01833 764 aa21.21■□□□□ 0.99
HDAC1-201ENST00000373548 SCP2P22307 547 aa21.21■□□□□ 0.99
HDAC1-201ENST00000373548 MS4A4AQ96JQ5 239 aa21.21■□□□□ 0.99
HDAC1-201ENST00000373548 PSMB7Q99436 277 aa21.21■□□□□ 0.99
HDAC1-201ENST00000373548 TSKSQ9UJT2 592 aa21.21■□□□□ 0.99
HDAC1-201ENST00000373548 PLXNB2O15031 1838 aa21.21■□□□□ 0.99
HDAC1-201ENST00000373548 K7ERI5 159 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 EXTL3O43909 919 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 SEC31AO94979 1220 aaKnown RBP21.2■□□□□ 0.98
HDAC1-201ENST00000373548 FTCDO95954 541 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 CXCR5P32302 372 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 GTF2H1P32780 548 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 ENPEPQ07075 957 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 DRP2Q13474 957 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 CAPSQ13938 189 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 TMEM63BQ5T3F8 832 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 GTF3C2Q8WUA4 911 aaPredicted RBP21.2■□□□□ 0.98
HDAC1-201ENST00000373548 GLG1Q92896 1179 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 COPS5Q92905 334 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.2■□□□□ 0.981e-6■■■■■ 31.4
HDAC1-201ENST00000373548 LOC102724159A0A0B4J2E5 919 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 CCDC151A5D8V7 595 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 ZNF233A6NK53 670 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 NOP56O00567 594 aaKnown RBP21.2■□□□□ 0.98
HDAC1-201ENST00000373548 MARK3P27448 753 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 GPC3P51654 580 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 BRD3Q15059 726 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 PWP2Q15269 919 aaKnown RBP21.2■□□□□ 0.98
HDAC1-201ENST00000373548 ZNF572Q7Z3I7 529 aaPredicted RBP21.2■□□□□ 0.98
HDAC1-201ENST00000373548 USP37Q86T82 979 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 DHX37Q8IY37 1157 aaKnown RBP21.2■□□□□ 0.98
HDAC1-201ENST00000373548 GPRC5AQ8NFJ5 357 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 TAS1R2Q8TE23 839 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 BBXQ8WY36 941 aaPredicted RBP21.2■□□□□ 0.98
HDAC1-201ENST00000373548 KREMEN1Q96MU8 473 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 SPATA33Q96N06 139 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 HAPLN2Q9GZV7 340 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 PDGFCQ9NRA1 345 aa21.2■□□□□ 0.98
HDAC1-201ENST00000373548 PDHXO00330 501 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 DLATP10515 647 aaKnown RBP21.19■□□□□ 0.98
HDAC1-201ENST00000373548 CETPP11597 493 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 GALCP54803 685 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 MEI1Q5TIA1 1274 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 SV2AQ7L0J3 742 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 FBXL13Q8NEE6 735 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 PSPC1Q8WXF1 523 aaKnown RBP21.19■□□□□ 0.98
HDAC1-201ENST00000373548 KIAA1586Q9HCI6 787 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 OGFRQ9NZT2 677 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 PPME1Q9Y570 386 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 ZBTB42B2RXF5 422 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 BTBD19C9JJ37 291 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 EDN1P05305 212 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 TXNP10599 105 aaKnown RBP21.19■□□□□ 0.98
HDAC1-201ENST00000373548 TNFAIP3P21580 790 aa21.19■□□□□ 0.98
HDAC1-201ENST00000373548 MKRN3Q13064 507 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms