RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 MYBPC2Q14324 1141 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 GLG1Q92896 1179 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 TAOK3Q9H2K8 898 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 CWC15Q9P013 229 aaKnown RBP25.73■■□□□ 1.71
CDK9-201ENST00000373264 GABBR1Q9UBS5 961 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 RRP15Q9Y3B9 282 aaKnown RBP25.73■■□□□ 1.71
CDK9-201ENST00000373264 GJA3Q9Y6H8 435 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 PEX10O60683 326 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 MMEP08473 750 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 MAPTP10636 758 aaKnown RBP25.73■■□□□ 1.71
CDK9-201ENST00000373264 HSPA9P38646 679 aaKnown RBP25.73■■□□□ 1.71
CDK9-201ENST00000373264 IRX5P78411 483 aaPredicted RBP25.73■■□□□ 1.71
CDK9-201ENST00000373264 LLGL1Q15334 1064 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 EPS8L1Q8TE68 723 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 CENPHQ9H3R5 247 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 PIM2Q9P1W9 311 aa25.73■■□□□ 1.71
CDK9-201ENST00000373264 BHMG1C9JSJ3 638 aaPredicted RBP25.72■■□□□ 1.71
CDK9-201ENST00000373264 ZBED4O75132 1171 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 IVLP07476 585 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 POU5F1Q01860 360 aaKnown RBP25.72■■□□□ 1.71
CDK9-201ENST00000373264 CEP85LQ5SZL2 805 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 SRLQ86TD4 932 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 C12orf56Q8IXR9 622 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 NOCTQ9UK39 431 aaKnown RBP25.72■■□□□ 1.71
CDK9-201ENST00000373264 KIAA1217Q5T5P2 1943 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 NR3C2P08235 984 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 GMPSP49915 693 aaPredicted RBP25.72■■□□□ 1.71
CDK9-201ENST00000373264 HMGCS2P54868 508 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 TAS1R2Q8TE23 839 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 PI4K2AQ9BTU6 479 aa25.72■■□□□ 1.71
CDK9-201ENST00000373264 COL11A1P12107 1806 aaPredicted RBP25.71■■□□□ 1.71
CDK9-201ENST00000373264 CCDC172P0C7W6 258 aa25.71■■□□□ 1.71
CDK9-201ENST00000373264 SNRNP48Q6IEG0 339 aaKnown RBP25.71■■□□□ 1.71
CDK9-201ENST00000373264 ZDHHC14Q8IZN3 488 aa25.71■■□□□ 1.71
CDK9-201ENST00000373264 MESDQ14696 234 aa25.71■■□□□ 1.71
CDK9-201ENST00000373264 CEP170P1Q96L14 293 aa25.71■■□□□ 1.71
CDK9-201ENST00000373264 CCDC188H7C350 402 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 MYO1CO00159 1063 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 ZNF280AP59817 542 aaPredicted RBP25.7■■□□□ 1.7
CDK9-201ENST00000373264 GUCY1A3Q02108 690 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 CETN1Q12798 172 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 ALCAMQ13740 583 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 LMBRD2Q68DH5 695 aaPredicted RBP25.7■■□□□ 1.7
CDK9-201ENST00000373264 SWSAP1Q6NVH7 229 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 TATDN2Q93075 761 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 MOV10L1Q9BXT6 1211 aaKnown RBP25.7■■□□□ 1.7
CDK9-201ENST00000373264 WDR81Q562E7 1941 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 PPFIA4O75335 1185 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 DLATP10515 647 aaKnown RBP25.7■■□□□ 1.7
CDK9-201ENST00000373264 VSIG10LQ86VR7 867 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 PARD3BQ8TEW8 1205 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 ST6GALNAC4Q9H4F1 302 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 KMT5AQ9NQR1 393 aa25.7■■□□□ 1.7
CDK9-201ENST00000373264 STBD1O95210 358 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 CCT5P48643 541 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 JAK3P52333 1124 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 C10orf67Q8IYJ2 551 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 FAM71AQ8IYT1 594 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 H0YGN5 161 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 KRT76Q01546 638 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 DMP1Q13316 513 aaPredicted RBP25.69■■□□□ 1.7
CDK9-201ENST00000373264 MKRN4PQ13434 485 aaPredicted RBP25.69■■□□□ 1.7
CDK9-201ENST00000373264 CUL1Q13616 776 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 NLRX1Q86UT6 975 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 ATP8B4Q8TF62 1192 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 PCDHA10Q9Y5I2 948 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 NFS1Q9Y697 457 aa25.69■■□□□ 1.7
CDK9-201ENST00000373264 TCRBV7S2A1N4TA0A589 114 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 COMTP21964 271 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 BACE1P56817 501 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 FMO1Q01740 532 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 TNFAIP1Q13829 316 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 MAP4K3Q8IVH8 894 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 CCDC60Q8IWA6 550 aaPredicted RBP25.68■■□□□ 1.7
CDK9-201ENST00000373264 HELQQ8TDG4 1101 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 UBLCP1Q8WVY7 318 aaPredicted RBP25.68■■□□□ 1.7
CDK9-201ENST00000373264 WRNIP1Q96S55 665 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 PCNTO95613 3336 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 ZNFX1Q9P2E3 1918 aaKnown RBP25.68■■□□□ 1.7
CDK9-201ENST00000373264 EIF3HO15372 352 aaKnown RBP eCLIP25.68■■□□□ 1.7
CDK9-201ENST00000373264 ZEB2O60315 1214 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 RFX1P22670 979 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 FSTL1Q12841 308 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 PHLDB2Q86SQ0 1253 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 BCAS4Q8TDM0 211 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 C18orf8Q96DM3 657 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 XPNPEP1Q9NQW7 623 aa25.68■■□□□ 1.7
CDK9-201ENST00000373264 CNOT7Q9UIV1 285 aaKnown RBP25.68■■□□□ 1.7
CDK9-201ENST00000373264 PARP14Q460N5 1801 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 KCNA2P16389 499 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 WNT7BP56706 349 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 GPC5P78333 572 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 DALRD3Q5D0E6 543 aaKnown RBP25.67■■□□□ 1.7
CDK9-201ENST00000373264 REPS2Q8NFH8 660 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 ZNF526Q8TF50 670 aaPredicted RBP25.67■■□□□ 1.7
CDK9-201ENST00000373264 POMGNT1Q8WZA1 660 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 SLITRK6Q9H5Y7 841 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 ANKEF1Q9NU02 776 aa25.67■■□□□ 1.7
CDK9-201ENST00000373264 P4HA2O15460 535 aa25.66■■□□□ 1.7
CDK9-201ENST00000373264 HPDP32754 393 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms