RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 ESYT2A0FGR8 921 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 DCDC2CA8MYV0 355 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 DDX3XO00571 662 aaKnown RBP eCLIP12.95□□□□□ -0.349e-7■■■□□ 15.3
NCDN-202ENST00000373243 ATF2P15336 505 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 GAP43P17677 238 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 ATP11AP98196 1134 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 EDRF1Q3B7T1 1238 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 ZNF449Q6P9G9 518 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 EPS8L3Q8TE67 593 aaKnown RBP12.95□□□□□ -0.34
NCDN-202ENST00000373243 IFT74Q96LB3 600 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 INPP4AQ96PE3 977 aaPredicted RBP12.95□□□□□ -0.34
NCDN-202ENST00000373243 TEKT3Q9BXF9 490 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 SYNCQ9H7C4 482 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 GDF3Q9NR23 364 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 LAMA4Q16363 1823 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 SLC16A4O15374 487 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 PJA2O43164 708 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 SUN1O94901 812 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 LMBRD2Q68DH5 695 aaPredicted RBP12.95□□□□□ -0.34
NCDN-202ENST00000373243 CDC42EP5Q6NZY7 148 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 ANAPC7Q9UJX3 599 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 IKBKGQ9Y6K9 419 aa12.95□□□□□ -0.34
NCDN-202ENST00000373243 EP400Q96L91 3159 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 NOL4O94818 638 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 NDUFB10O96000 172 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 IMPDH2P12268 514 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 EIF3BP55884 814 aaKnown RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 PPP2R5EQ16537 467 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 WDR44Q5JSH3 913 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 RNF168Q8IYW5 571 aaPredicted RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 MAGEC3Q8TD91 643 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 SLC20A1Q8WUM9 679 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 SEMA4AQ9H3S1 761 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 CNOT10Q9H9A5 744 aaKnown RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 RBM47A0AV96 593 aaKnown RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 TCP11X1B4DZS4 312 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 CLDN3O15551 220 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 EIF2AK2P19525 551 aaKnown RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 ERFP50548 548 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 ZFPM1Q8IX07 1006 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 ERP44Q9BS26 406 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 MAF1Q9H063 256 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 ANAPC5Q9UJX4 755 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 ABCB11O95342 1321 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 BAZ2AQ9UIF9 1905 aaKnown RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 H0Y3Z8 333 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 COMTP21964 271 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 HNRNPH3P31942 346 aaKnown RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 STAT2P52630 851 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 GPC5P78333 572 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 IFI35P80217 286 aaPredicted RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 SLC10A5Q5PT55 438 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 DCUN1D2Q6PH85 259 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 CEP128Q6ZU80 1094 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 LRRC34Q8IZ02 419 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 MIPOL1Q8TD10 442 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 C9orf72Q96LT7 481 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 TAS2R14Q9NYV8 317 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 DLGAP2Q9P1A6 1054 aa12.94□□□□□ -0.34
NCDN-202ENST00000373243 CNOT8Q9UFF9 292 aaKnown RBP12.94□□□□□ -0.34
NCDN-202ENST00000373243 HNRNPDLO14979 420 aaKnown RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 MGRN1O60291 552 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 RPA1P27694 616 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ORC2Q13416 577 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 ANKRD20A2Q5SQ80 823 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 C6orf118Q5T5N4 469 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ANKRD20A1Q5TYW2 823 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ANKRD20A3Q5VUR7 823 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 PADI6Q6TGC4 694 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 USP37Q86T82 979 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ERICH1Q86X53 443 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 SYN2Q92777 582 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 PURBQ96QR8 312 aaKnown RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 TRIM7Q9C029 511 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 FGFR1OP2Q9NVK5 253 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 DNAAF2Q9NVR5 837 aaKnown RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 AIPL1Q9NZN9 384 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 CCPG1Q9ULG6 757 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 TISP43B9A030 160 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 MSH4O15457 936 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 BRAFP15056 766 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ATP5DP30049 168 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 GCLCP48506 637 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 DYNLT1P63172 113 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ITIH3Q06033 890 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ZRSR2Q15696 482 aaKnown RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 WDR78Q5VTH9 848 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 TMEM154Q6P9G4 183 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 CCHCR1Q8TD31 782 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ATG4AQ8WYN0 398 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 ABTB1Q969K4 478 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 ARHGEF26Q96DR7 871 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
NCDN-202ENST00000373243 AGPAT1Q99943 283 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 LXNQ9BS40 222 aa12.93□□□□□ -0.34
NCDN-202ENST00000373243 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms