RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 RIBC1Q8N443 379 aaPredicted RBP11.71□□□□□ -0.53
LCN2-202ENST00000372998 TMC2Q8TDI7 906 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 ART4Q93070 314 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 ZBTB9Q96C00 473 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 GRAMD1AQ96CP6 724 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 FIZ1Q96SL8 496 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 MXRA8Q9BRK3 442 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 GPR88Q9GZN0 384 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 MAF1Q9H063 256 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 THAP2Q9H0W7 228 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 NEUROG2Q9H2A3 272 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 LRRC19Q9H756 370 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 PPCSQ9HAB8 311 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 UBE2TQ9NPD8 197 aaPredicted RBP11.71□□□□□ -0.53
LCN2-202ENST00000372998 ANKEF1Q9NU02 776 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 GINM1Q9NU53 330 aa11.71□□□□□ -0.53
LCN2-202ENST00000372998 PSME4Q14997 1843 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 ADAMTSL1Q8N6G6 1762 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 EMSYQ7Z589 1322 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 DDTLA6NHG4 134 aaPredicted RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 IPO5O00410 1097 aaKnown RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 RASGRF2O14827 1237 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 SPOPO43791 374 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 HIP1RO75146 1068 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 ECEL1O95672 775 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 MMEP08473 750 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 FDX1P10109 184 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 SFNP31947 248 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 JAK3P52333 1124 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 PLTPP55058 493 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 IRX3P78415 501 aaPredicted RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 GTF2BQ00403 316 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 GHRHRQ02643 423 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 CENPCQ03188 943 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 PTP4A2Q12974 167 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 NR1H3Q13133 447 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 NEDD9Q14511 834 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 DOK7Q18PE1 504 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 CBWD6Q4V339 395 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 CBWD3Q5JTY5 395 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 CBWD5Q5RIA9 395 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 FKBP1CQ5VVH2 108 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 FBXW10Q5XX13 1052 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 XRRA1Q6P2D8 792 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 GJB7Q6PEY0 223 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
LCN2-202ENST00000372998 PTF1AQ7RTS3 328 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 PIGWQ7Z7B1 504 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 SLC13A5Q86YT5 568 aaPredicted RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 SIAH1Q8IUQ4 282 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 GPIHBP1Q8IV16 184 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 PARP9Q8IXQ6 854 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 CCDC105Q8IYK2 499 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 FAM71AQ8IYT1 594 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 RPUSD2Q8IZ73 545 aaKnown RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 LMO3Q8TAP4 145 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 PIGOQ8TEQ8 1089 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 ATXN2LQ8WWM7 1075 aaKnown RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 KAT2BQ92831 832 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 IFT74Q96LB3 600 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 LXNQ9BS40 222 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 SLC40A1Q9NP59 571 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 OSGEPQ9NPF4 335 aa11.7□□□□□ -0.54
LCN2-202ENST00000372998 AVENQ9NQS1 362 aaPredicted RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 AJAP1Q9UKB5 411 aaPredicted RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 ZNF646O15015 1829 aaPredicted RBP11.7□□□□□ -0.54
LCN2-202ENST00000372998 VGLL3A8MV65 326 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 O00370 1275 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 FOXN3O00409 490 aaPredicted RBP11.69□□□□□ -0.54
LCN2-202ENST00000372998 OPLAHO14841 1288 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 THAP12O43422 761 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 TBC1D12O60347 775 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 CAND2O75155 1236 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 TCEA3O75764 348 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 GH2P01242 217 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 MAP2K2P36507 400 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 QARSP47897 775 aaKnown RBP11.69□□□□□ -0.54
LCN2-202ENST00000372998 PEX5P50542 639 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 GSCP56915 257 aaPredicted RBP11.69□□□□□ -0.54
LCN2-202ENST00000372998 CDR2Q01850 454 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 RIPK1Q13546 671 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 PPP1R7Q15435 360 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 TRADDQ15628 312 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 ZC2HC1CQ53FD0 456 aaPredicted RBP11.69□□□□□ -0.54
LCN2-202ENST00000372998 TNFAIP8L3Q5GJ75 292 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 KRT39Q6A163 491 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 ACAD10Q6JQN1 1059 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 PHLDB3Q6NSJ2 640 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 CCDC174Q6PII3 467 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 CRELD2Q6UXH1 353 aaPredicted RBP11.69□□□□□ -0.54
LCN2-202ENST00000372998 TRIM72Q6ZMU5 477 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 OR2W6PQ8NHA6 318 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 GIMAP7Q8NHV1 300 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 SELENOSQ9BQE4 189 aa11.69□□□□□ -0.54
LCN2-202ENST00000372998 TRIM51Q9BSJ1 452 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms