RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 COMTP21964 271 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 HNRNPH1P31943 449 aaKnown RBP20.61■□□□□ 0.89
TMEM53-202ENST00000372237 TCEAL1Q15170 157 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 DENND2CQ68D51 928 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 TLCD1Q96CP7 247 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 RPS6KC1Q96S38 1066 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 CNOT10Q9H9A5 744 aaKnown RBP20.61■□□□□ 0.89
TMEM53-202ENST00000372237 PLA2G6O60733 806 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 SHBGP04278 402 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 PLS3P13797 630 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 MXI1P50539 228 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 QPCTQ16769 361 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 ZDHHC24Q6UX98 284 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 C12orf56Q8IXR9 622 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 PRELID2Q8N945 189 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 KAT5Q92993 513 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 EPB41L4BQ9H329 900 aa20.61■□□□□ 0.89
TMEM53-202ENST00000372237 PODXLO00592 558 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 SGPL1O95470 568 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 DPEP1P16444 411 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 PTGIRP43119 386 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 RARRES1P49788 294 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 C1orf220Q5T0J3 134 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 ARMC9Q7Z3E5 817 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 HAUS6Q7Z4H7 955 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 RTKN2Q8IZC4 609 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 ZSWIM2Q8NEG5 633 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 EPS8L1Q8TE68 723 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 TMEM174Q8WUU8 243 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 CABS1Q96KC9 395 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.6■□□□□ 0.89
TMEM53-202ENST00000372237 PCYOX1Q9UHG3 505 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 FEM1BQ9UK73 627 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 PNMA2Q9UL42 364 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 SPDYE2BA6NHP3 402 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 BACH1O14867 736 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 ATMINO43313 823 aaPredicted RBP20.6■□□□□ 0.89
TMEM53-202ENST00000372237 SPDYE6P0CI01 402 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 CTNNA2P26232 953 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 BYSLQ13895 437 aaKnown RBP20.6■□□□□ 0.89
TMEM53-202ENST00000372237 CCDC137Q6PK04 289 aaKnown RBP20.6■□□□□ 0.89
TMEM53-202ENST00000372237 CCDC121Q6ZUS5 278 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 PPM1KQ8N3J5 372 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 PLEKHO2Q8TD55 490 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 FAM151AQ8WW52 585 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 AGBL1Q96MI9 1066 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 PCDHB18PQ96TA0 734 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 SH2D3AQ9BRG2 576 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 TMEM117Q9H0C3 514 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 WNT8AQ9H1J5 351 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 DBR1Q9UK59 544 aaKnown RBP20.6■□□□□ 0.89
TMEM53-202ENST00000372237 CCPG1Q9ULG6 757 aa20.6■□□□□ 0.89
TMEM53-202ENST00000372237 PEX5P50542 639 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 GTF2A1P52655 376 aaPredicted RBP20.59■□□□□ 0.89
TMEM53-202ENST00000372237 KCNV1Q6PIU1 500 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 SLC16A10Q8TF71 515 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 GRHL1Q9NZI5 618 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 CCDC169A6NNP5 214 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 DHX15O43143 795 aaKnown RBP20.59■□□□□ 0.89
TMEM53-202ENST00000372237 GGPS1O95749 300 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 GZMAP12544 262 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 GBP1P32455 592 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 RPL21P46778 160 aaKnown RBP20.59■□□□□ 0.89
TMEM53-202ENST00000372237 HSD17B4P51659 736 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 CPLX4Q7Z7G2 160 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 NOP9Q86U38 636 aaKnown RBP20.59■□□□□ 0.89
TMEM53-202ENST00000372237 MDM1Q8TC05 714 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 MORC4Q8TE76 937 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 MTRF1LQ9UGC7 380 aaKnown RBP20.59■□□□□ 0.89
TMEM53-202ENST00000372237 PARP2Q9UGN5 583 aa20.59■□□□□ 0.89
TMEM53-202ENST00000372237 TLDC2A0PJX2 215 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 QARSP47897 775 aaKnown RBP20.58■□□□□ 0.89
TMEM53-202ENST00000372237 GTF2BQ00403 316 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 ACTN3Q08043 901 aaPredicted RBP20.58■□□□□ 0.89
TMEM53-202ENST00000372237 DRP2Q13474 957 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 SLC29A2Q14542 456 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 TRMT1LQ7Z2T5 733 aaKnown RBP20.58■□□□□ 0.89
TMEM53-202ENST00000372237 FAM71AQ8IYT1 594 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 ZDHHC14Q8IZN3 488 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 CACNA2D3Q8IZS8 1091 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 IL31RAQ8NI17 732 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 RNF25Q96BH1 459 aaPredicted RBP20.58■□□□□ 0.89
TMEM53-202ENST00000372237 SEC16BQ96JE7 1060 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 ACP6Q9NPH0 428 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 COL20A1Q9P218 1284 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 ZNF70Q9UC06 446 aaPredicted RBP20.58■□□□□ 0.89
TMEM53-202ENST00000372237 NOCTQ9UK39 431 aaKnown RBP20.58■□□□□ 0.89
TMEM53-202ENST00000372237 TRPC6Q9Y210 931 aa20.58■□□□□ 0.89
TMEM53-202ENST00000372237 GOLGA8IPA6NC78 632 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 C5orf60A6NFR6 353 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 GOLGA8JA6NMD2 632 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 MAPK13O15264 365 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 CYP26A1O43174 497 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 SPOPO43791 374 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 PYGMP11217 842 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 CHRNB2P17787 502 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 RASA3Q14644 834 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 TTC27Q6P3X3 843 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 MIGA2Q7L4E1 593 aa20.58■□□□□ 0.88
TMEM53-202ENST00000372237 SLC47A2Q86VL8 602 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms