RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CCDC90BQ9GZT6 254 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 NUDCD3Q8IVD9 361 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 NRBF2Q96F24 287 aa25.42■■□□□ 1.66
RAPGEF1-203ENST00000372195 HSPA8P11142 646 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 ALDH18A1P54886 795 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 IMPG1Q17R60 797 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 FAM102AQ5T9C2 384 aaPredicted RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 DFFAO00273 331 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 ELF1P32519 619 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 ZBTB18Q99592 522 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 E2F8A0AVK6 867 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 ASNSP08243 561 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 GNL1P36915 607 aaPredicted RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 PAPOLAP51003 745 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 RAD23BP54727 409 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 PRDM5Q9NQX1 630 aaPredicted RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 SUGT1Q9Y2Z0 365 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 HUS1O60921 280 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 HEATR6Q6AI08 1181 aaKnown RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 THEM5Q8N1Q8 247 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 CPA5Q8WXQ8 436 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 BTBD6Q96KE9 485 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 CHUKO15111 745 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 MXD4Q14582 209 aaPredicted RBP25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 CDC42BPGQ6DT37 1551 aa25.41■■□□□ 1.66
RAPGEF1-203ENST00000372195 SLC26A7Q8TE54 656 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 SIK2Q9H0K1 926 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 CHRNA3P32297 505 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 DBR1Q9UK59 544 aaKnown RBP25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 KPNA7A9QM74 516 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 QARSP47897 775 aaKnown RBP25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 RNF146Q9NTX7 359 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 SLC13A4Q9UKG4 626 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 TCP11X1B4DZS4 312 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 ATP9BO43861 1147 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 ATP2C1P98194 919 aaPredicted RBP25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 SPATA4Q8NEY3 305 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 TTC25Q96NG3 672 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 AKR1B1P15121 316 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 SDC4P31431 198 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 GRAMD4Q6IC98 578 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 TTC13Q8NBP0 860 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 OR2W6PQ8NHA6 318 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 WNT8AQ9H1J5 351 aa25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 MORC2Q9Y6X9 1032 aaPredicted RBP25.4■■□□□ 1.66
RAPGEF1-203ENST00000372195 CCDC78A2IDD5 438 aa25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 COL15A1P39059 1388 aa25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 HNRNPCL2B2RXH8 293 aa25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 HNRNPCL1O60812 293 aaKnown RBP25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 ING2Q9H160 280 aa25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 RBAKQ9NYW8 714 aaPredicted RBP25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 P4HBP07237 508 aaKnown RBP25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 LONRF1Q17RB8 773 aa25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 MCPH1Q8NEM0 835 aa25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 AGPAT1Q99943 283 aa25.39■■□□□ 1.66
RAPGEF1-203ENST00000372195 SYCE1LA8MT33 242 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 F5H6K3 240 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 PHKA2P46019 1235 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 KLRC3Q07444 240 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 TTLL6Q8N841 843 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 CYP26B1Q9NR63 512 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 AGPAT5Q9NUQ2 364 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 CIITAP33076 1130 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 TFDP2Q14188 446 aa25.39■■□□□ 1.65
RAPGEF1-203ENST00000372195 UBA6A0AVT1 1052 aaPredicted RBP25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 KIF2CQ99661 725 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 CAV1Q03135 178 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 CUL3Q13618 768 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 EFTUD2Q15029 972 aaKnown RBP eCLIP25.38■■□□□ 1.653e-6■■■■■ 39.1
RAPGEF1-203ENST00000372195 SEPT12Q8IYM1 358 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 RNPC3Q96LT9 517 aaKnown RBP25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 ABT1Q9ULW3 272 aaKnown RBP25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 TFR2Q9UP52 801 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 KRT39Q6A163 491 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 DDIASQ8IXT1 998 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 GPD1LQ8N335 351 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 FAM20AQ96MK3 541 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 ZCWPW1Q9H0M4 648 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 STRIP2Q9ULQ0 834 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 DCAF4L1Q3SXM0 396 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 NEO1Q92859 1461 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 SEC24DO94855 1032 aaPredicted RBP25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 TNFAIP2Q03169 654 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 LBRQ14739 615 aaKnown RBP25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 FBXW10Q5XX13 1052 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 TTC8Q8TAM2 541 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 RIN2Q8WYP3 895 aaPredicted RBP25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 TBC1D22BQ9NU19 505 aa25.38■■□□□ 1.65
RAPGEF1-203ENST00000372195 CLEC10AQ8IUN9 316 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 SLC35G2Q8TBE7 412 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 MXD3Q9BW11 206 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 CDH6P55285 790 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 ENO1P06733 434 aaKnown RBP25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 BEST2Q8NFU1 509 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 ATXN3P54252 364 aaPredicted RBP25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 MORF4L2Q15014 288 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 FASTKD1Q53R41 847 aaKnown RBP25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 KIAA1755Q5JYT7 1200 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 GCNAQ96QF7 691 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 MMTAG2Q9BU76 263 aaKnown RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms