RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 HDAC11Q96DB2 347 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 PARVAQ9NVD7 372 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 FBXL5Q9UKA1 691 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 DEPDC5O75140 1603 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 NPHP3-ACAD11A0A0J9YXS1 232 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 TYW5A2RUC4 315 aaKnown RBP12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 P4HA2O15460 535 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 MAFGO15525 162 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 GNAT1P11488 350 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 SCP2P22307 547 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 Q3C1V9 767 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 DSTYKQ6XUX3 929 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 BEST2Q8NFU1 509 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 SNF8Q96H20 258 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 FGFR1OP2Q9NVK5 253 aa12.63□□□□□ -0.39
DEPDC1-201ENST00000370966 DCCP43146 1447 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 COPEO14579 308 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 TTI1O43156 1089 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 BRAFP15056 766 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 KYAT1Q16773 422 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 WDR75Q8IWA0 830 aaKnown RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 RBM46Q8TBY0 533 aaKnown RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 NUDCD1Q96RS6 583 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 MEGF6O75095 1541 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 TOM1L1O75674 476 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 BYSLQ13895 437 aaKnown RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 RBBP5Q15291 538 aaKnown RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 FIGNQ5HY92 759 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 MOXD1Q6UVY6 613 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 SYDE1Q6ZW31 735 aaPredicted RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 EPM2AIP1Q7L775 607 aaPredicted RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 EPS15L1Q9UBC2 864 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 CYP26A1O43174 497 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 HUS1O60921 280 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 TOB1P50616 345 aaPredicted RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 SEPT6Q14141 434 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 ATL2Q8NHH9 583 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 DEPDC1BQ8WUY9 529 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 CFAP36Q96G28 342 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 PPP1R16BQ96T49 567 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 POLR3CQ9BUI4 534 aaPredicted RBP12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 WDR91A4D1P6 747 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 TKFCQ3LXA3 575 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 RHPN2Q8IUC4 686 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 REXO1L1PQ8IX06 675 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 VPS39Q96JC1 886 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 FAM96AQ9H5X1 160 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 KBTBD4Q9NVX7 518 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 STAP1Q9ULZ2 295 aa12.62□□□□□ -0.39
DEPDC1-201ENST00000370966 KRT3P12035 628 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 STAT5BP51692 787 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 E2F5Q15329 346 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 XRRA1Q6P2D8 792 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 CRLF3Q8IUI8 442 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 HNRNPLLQ8WVV9 542 aaKnown RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 SPDYE16A6NNV3 312 aaPredicted RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 ZNF185O15231 689 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 KRT14P02533 472 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 SPDYE2Q495Y8 402 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 CNPY4Q8N129 248 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 TRIM56Q9BRZ2 755 aaKnown RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 SENP1Q9P0U3 644 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 INTUQ9ULD6 942 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 FHOD1Q9Y613 1164 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 OPHN1O60890 802 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 NR3C2P08235 984 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 SLC9A1P19634 815 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 NFX1Q12986 1120 aaKnown RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 BAATQ14032 418 aaPredicted RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 ATP11CQ8NB49 1132 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 SLC35G2Q8TBE7 412 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 ANKS1AQ92625 1134 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 TMEM253P0C7T8 217 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 BCAR1P56945 870 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 NLRP14Q86W24 1093 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 SYT2Q8N9I0 419 aaPredicted RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 DHX38Q92620 1227 aaKnown RBP12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 CHMP6Q96FZ7 201 aa12.61□□□□□ -0.39
DEPDC1-201ENST00000370966 PPP1R37O75864 691 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 GPS1Q13098 491 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 NWD1Q149M9 1564 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 JADE1Q6IE81 842 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 SPOPLQ6IQ16 392 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 HVCN1Q96D96 273 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 LRGUKQ96M69 825 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TTC1Q99614 292 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 MXRA8Q9BRK3 442 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 EFHD1Q9BUP0 239 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 WDR35Q9P2L0 1181 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 ZNF70Q9UC06 446 aaPredicted RBP12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TTC7AQ9ULT0 858 aaPredicted RBP12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 RGL2O15211 777 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TTC4O95801 387 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 MYBP10242 640 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 CHRNA5P30532 468 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 HMGCS2P54868 508 aa12.6□□□□□ -0.39
DEPDC1-201ENST00000370966 TMPRSS15P98073 1019 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms