RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 HINFPQ9BQA5 517 aa17.25■□□□□ 0.35
SSR4-204ENST00000370087 RPP25Q9BUL9 199 aaKnown RBP17.25■□□□□ 0.35
SSR4-204ENST00000370087 EIF2AQ9BY44 585 aaKnown RBP17.25■□□□□ 0.35
SSR4-204ENST00000370087 MIOSQ9NXC5 875 aa17.25■□□□□ 0.35
SSR4-204ENST00000370087 DLL3Q9NYJ7 618 aa17.25■□□□□ 0.35
SSR4-204ENST00000370087 WRAP73Q9P2S5 460 aaPredicted RBP17.25■□□□□ 0.35
SSR4-204ENST00000370087 STK39Q9UEW8 545 aa17.25■□□□□ 0.35
SSR4-204ENST00000370087 NUMBLQ9Y6R0 609 aa17.25■□□□□ 0.35
SSR4-204ENST00000370087 CNTNAP2Q9UHC6 1331 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 EML1O00423 815 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 LAMP2P13473 410 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 NCLP19338 710 aaKnown RBP17.24■□□□□ 0.35
SSR4-204ENST00000370087 DSG1Q02413 1049 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 DSC1Q08554 894 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 PUM1Q14671 1186 aaKnown RBP eCLIP17.24■□□□□ 0.35
SSR4-204ENST00000370087 PALB2Q86YC2 1186 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 GLYCTKQ8IVS8 523 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 C1orf210Q8IVY1 113 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 SUMF1Q8NBK3 374 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 PJA1Q8NG27 643 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 BICD2Q8TD16 824 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 BRF1Q92994 677 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 TMEM143Q96AN5 459 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 ZFP42Q96MM3 310 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 SLC26A6Q9BXS9 759 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 NT5C3AQ9H0P0 336 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 SIT1Q9Y3P8 196 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 HES2Q9Y543 173 aa17.24■□□□□ 0.35
SSR4-204ENST00000370087 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 TGM5O43548 720 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 KRT37O76014 449 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 SRGAP2CP0DJJ0 459 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 MLH1P40692 756 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 SCNN1GP51170 649 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 NONOQ15233 471 aaKnown RBP eCLIP17.23■□□□□ 0.35
SSR4-204ENST00000370087 DCLRE1AQ6PJP8 1040 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 CYP26C1Q6V0L0 522 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 CCDC148Q8NFR7 591 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
SSR4-204ENST00000370087 RUBCNQ92622 972 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 MBOAT7Q96N66 472 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 GAD1Q99259 594 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 SLC2A4RGQ9NR83 387 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 KANSL3Q9P2N6 904 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 IPPQ9Y573 584 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 GPR179Q6PRD1 2367 aa17.23■□□□□ 0.35
SSR4-204ENST00000370087 CYP3A7-CYP3A51PA0A087WV96 503 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 ARL5CA6NH57 179 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 SLC37A4O43826 429 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 RPL17P18621 184 aaKnown RBP17.22■□□□□ 0.35
SSR4-204ENST00000370087 CYP3A7P24462 503 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 PSMC5P62195 406 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 LAMTOR4Q0VGL1 99 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 RSPO4Q2I0M5 234 aaPredicted RBP17.22■□□□□ 0.35
SSR4-204ENST00000370087 RABGGTAQ92696 567 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 FGF14Q92915 247 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 NXPE3Q969Y0 559 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 CNTNAP3BQ96NU0 1288 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 CNTNAP3Q9BZ76 1288 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 GPR62Q9BZJ7 368 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 NCOA5Q9HCD5 579 aaKnown RBP17.22■□□□□ 0.35
SSR4-204ENST00000370087 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 CACNG4Q9UBN1 327 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 VAV3Q9UKW4 847 aa17.22■□□□□ 0.35
SSR4-204ENST00000370087 NOTCH4Q99466 2003 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 M0R2N6 131 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 TSPAN1O60635 241 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 ITGA4P13612 1032 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 NTHL1P78549 312 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 FGD1P98174 961 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 NPY5RQ15761 445 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 LILRA6Q6PI73 481 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 ZC3H14Q6PJT7 736 aaKnown RBP17.21■□□□□ 0.35
SSR4-204ENST00000370087 PARM1Q6UWI2 310 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 SRGAP1Q7Z6B7 1085 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 CPB2Q96IY4 423 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 RNF26Q9BY78 433 aaPredicted RBP17.21■□□□□ 0.35
SSR4-204ENST00000370087 PRKD2Q9BZL6 878 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 DHX33Q9H6R0 707 aaKnown RBP17.21■□□□□ 0.35
SSR4-204ENST00000370087 PIDD1Q9HB75 910 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 SSX2IPQ9Y2D8 614 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 MTF2Q9Y483 593 aaPredicted RBP17.21■□□□□ 0.35
SSR4-204ENST00000370087 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
SSR4-204ENST00000370087 GAS2O43903 313 aaKnown RBP17.2■□□□□ 0.34
SSR4-204ENST00000370087 NLRP5P59047 1200 aa17.2■□□□□ 0.34
SSR4-204ENST00000370087 STARD6P59095 220 aa17.2■□□□□ 0.34
SSR4-204ENST00000370087 GPC5P78333 572 aa17.2■□□□□ 0.34
SSR4-204ENST00000370087 KRT32Q14532 448 aa17.2■□□□□ 0.34
SSR4-204ENST00000370087 PSPC1Q8WXF1 523 aaKnown RBP17.2■□□□□ 0.34
SSR4-204ENST00000370087 CEP170P1Q96L14 293 aa17.2■□□□□ 0.34
SSR4-204ENST00000370087 JAKMIP1Q96N16 626 aaKnown RBP17.2■□□□□ 0.34
SSR4-204ENST00000370087 APOL6Q9BWW8 343 aa17.2■□□□□ 0.34
SSR4-204ENST00000370087 NXF3Q9H4D5 531 aaKnown RBP17.2■□□□□ 0.34
SSR4-204ENST00000370087 ZDHHC7Q9NXF8 308 aa17.2■□□□□ 0.34
SSR4-204ENST00000370087 CACNA1BQ00975 2339 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 IFNAR1P17181 557 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 CCT2P78371 535 aaKnown RBP17.19■□□□□ 0.34
SSR4-204ENST00000370087 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
SSR4-204ENST00000370087 FUT10Q6P4F1 479 aa17.19■□□□□ 0.34
SSR4-204ENST00000370087 ELMSAN1Q6PJG2 1045 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms