RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 GRK4P32298 578 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 ADKP55263 362 aaKnown RBP26.04■■□□□ 1.76
SNX3-203ENST00000368979 ZNF410Q86VK4 478 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 CBWD2Q8IUF1 395 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 C7orf31Q8N865 590 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 IQCDQ96DY2 449 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 ACO2Q99798 780 aaKnown RBP26.04■■□□□ 1.76
SNX3-203ENST00000368979 INO80B-WBP1J3KQ70 363 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 TPM1P09493 284 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 FAM187BQ17R55 369 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 RUFY4Q6ZNE9 571 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 CNGA4Q8IV77 575 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 CPLX3Q8WVH0 158 aa26.04■■□□□ 1.76
SNX3-203ENST00000368979 ZBTB45Q96K62 511 aaPredicted RBP26.04■■□□□ 1.76
SNX3-203ENST00000368979 INO80BQ9C086 356 aaPredicted RBP26.04■■□□□ 1.76
SNX3-203ENST00000368979 FRMPD3Q5JV73 1810 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 A0A0B4J269 797 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 TREHO43280 583 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 EXTL3O43909 919 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 TOM1L1O75674 476 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 ASGR1P07306 291 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 GNAT1P11488 350 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 VAMP7P51809 220 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 PLEKHO2Q8TD55 490 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 MFSD14AQ96MC6 490 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 PCMTD1Q96MG8 357 aaPredicted RBP26.03■■□□□ 1.76
SNX3-203ENST00000368979 PPP1R16BQ96T49 567 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 TMX1Q9H3N1 280 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 KIAA1586Q9HCI6 787 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 PRMT7Q9NVM4 692 aaPredicted RBP26.03■■□□□ 1.76
SNX3-203ENST00000368979 AGO2Q9UKV8 859 aaKnown RBP26.03■■□□□ 1.76
SNX3-203ENST00000368979 CAPN11Q9UMQ6 739 aa26.03■■□□□ 1.76
SNX3-203ENST00000368979 PCNTO95613 3336 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 TTC26A0AVF1 554 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 GTPBP10A4D1E9 387 aaKnown RBP26.02■■□□□ 1.76
SNX3-203ENST00000368979 RNF225M0QZC1 329 aaPredicted RBP26.02■■□□□ 1.76
SNX3-203ENST00000368979 ABLIM1O14639 778 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 IQCF3P0C7M6 154 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 TRIM49P0CI25 452 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 TRIM49CP0CI26 452 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 TRIM21P19474 475 aaKnown RBP26.02■■□□□ 1.76
SNX3-203ENST00000368979 NLRP11P59045 1033 aaKnown RBP26.02■■□□□ 1.76
SNX3-203ENST00000368979 ZNF200P98182 395 aaPredicted RBP26.02■■□□□ 1.76
SNX3-203ENST00000368979 CDC42EP1Q00587 391 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 ENPEPQ07075 957 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 KCNA10Q16322 511 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 TSHZ1Q6ZSZ6 1077 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 PCSK9Q8NBP7 692 aaKnown RBP26.02■■□□□ 1.76
SNX3-203ENST00000368979 NLRP7Q8WX94 980 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 FAM49AQ9H0Q0 323 aaPredicted RBP26.02■■□□□ 1.76
SNX3-203ENST00000368979 ADAMTS10Q9H324 1103 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 WBP1LQ9NX94 342 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 ANKFY1Q9P2R3 1169 aa26.02■■□□□ 1.76
SNX3-203ENST00000368979 A0A1W2PQJ5 194 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 ESPNB1AK53 854 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 PROZP22891 400 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 FMO5P49326 533 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 DLG4P78352 724 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 AMHR2Q16671 573 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 NBPF20Q3BBV1 942 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 C1orf220Q5T0J3 134 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 CCDC112Q8NEF3 446 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 CCDC51Q96ER9 411 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 PANX2Q96RD6 677 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 MMRN2Q9H8L6 949 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 HMX1Q9NP08 348 aaPredicted RBP26.01■■□□□ 1.75
SNX3-203ENST00000368979 GTF2IRD1Q9UHL9 959 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 PYCARDQ9ULZ3 195 aa26.01■■□□□ 1.75
SNX3-203ENST00000368979 GPR32O75388 356 aa26■■□□□ 1.75
SNX3-203ENST00000368979 LDHAP00338 332 aaKnown RBP26■■□□□ 1.75
SNX3-203ENST00000368979 CYP24A1Q07973 514 aa26■■□□□ 1.75
SNX3-203ENST00000368979 PRPF4BQ13523 1007 aaKnown RBP26■■□□□ 1.75
SNX3-203ENST00000368979 HSP90AA2PQ14568 343 aaPredicted RBP26■■□□□ 1.75
SNX3-203ENST00000368979 SRGAP1Q7Z6B7 1085 aa26■■□□□ 1.75
SNX3-203ENST00000368979 TMEM139Q8IV31 216 aa26■■□□□ 1.75
SNX3-203ENST00000368979 TMC2Q8TDI7 906 aa26■■□□□ 1.75
SNX3-203ENST00000368979 PRIMPOLQ96LW4 560 aa26■■□□□ 1.75
SNX3-203ENST00000368979 FAM213AQ9BRX8 229 aa26■■□□□ 1.75
SNX3-203ENST00000368979 MSTO1Q9BUK6 570 aa26■■□□□ 1.75
SNX3-203ENST00000368979 PTPRHQ9HD43 1115 aa26■■□□□ 1.75
SNX3-203ENST00000368979 CNTNAP2Q9UHC6 1331 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 EPHB6O15197 1021 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 CLDN3O15551 220 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 B4GALT5O43286 388 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 SKILP12757 684 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 MCL1Q07820 350 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 ATF7IP2Q5U623 682 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 CRELD2Q6UXH1 353 aaPredicted RBP25.99■■□□□ 1.75
SNX3-203ENST00000368979 RNF180Q86T96 592 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 SESTD1Q86VW0 696 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 PARD3BQ8TEW8 1205 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 CRACR2AQ9BSW2 395 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 FAM207AQ9NSI2 230 aaPredicted RBP25.99■■□□□ 1.75
SNX3-203ENST00000368979 ABHD10Q9NUJ1 306 aa25.99■■□□□ 1.75
SNX3-203ENST00000368979 ZNF233A6NK53 670 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 KRT9P35527 623 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 KIZQ2M2Z5 673 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 CBWD6Q4V339 395 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 CBWD3Q5JTY5 395 aa25.98■■□□□ 1.75
SNX3-203ENST00000368979 CBWD5Q5RIA9 395 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms