RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 LRRC55Q6ZSA7 311 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 FAM228AQ86W67 206 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 IGSF22Q8N9C0 903 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 SPC24Q8NBT2 197 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 SNX29Q8TEQ0 813 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 PPP2R3CQ969Q6 453 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 CALML4Q96GE6 196 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 BPIFA3Q9BQP9 254 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 PHF7Q9BWX1 381 aaPredicted RBP11.03□□□□□ -0.64
TPM3-210ENST00000368530 RAB34Q9BZG1 259 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 TLE6Q9H808 572 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 LRFN2Q9ULH4 789 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 PCDHB7Q9Y5E2 793 aa11.03□□□□□ -0.64
TPM3-210ENST00000368530 MAFBQ9Y5Q3 323 aaPredicted RBP11.03□□□□□ -0.64
TPM3-210ENST00000368530 COL1A2P08123 1366 aa11.02□□□□□ -0.64
TPM3-210ENST00000368530 PLXNA4Q9HCM2 1894 aa11.02□□□□□ -0.64
TPM3-210ENST00000368530 CYP3A7-CYP3A51PA0A087WV96 503 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 TBKBP1A7MCY6 615 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 DDX39AO00148 427 aaKnown RBP11.02□□□□□ -0.65
TPM3-210ENST00000368530 FGFR1P11362 822 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 ATF7P17544 494 aaPredicted RBP11.02□□□□□ -0.65
TPM3-210ENST00000368530 CYP3A7P24462 503 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 ZNF75DP51815 510 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 CRYBB1P53674 252 aaPredicted RBP11.02□□□□□ -0.65
TPM3-210ENST00000368530 KIZQ2M2Z5 673 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 EFCAB3Q8N7B9 438 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 LINC01465Q8N7H1 131 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 COLGALT1Q8NBJ5 622 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 ASIC4Q96FT7 647 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 CDK5RAP3Q96JB5 506 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.65
TPM3-210ENST00000368530 ZNF302Q9NR11 478 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 TLR9Q9NR96 1032 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 C1orf112Q9NSG2 853 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 TMEM161AQ9NX61 479 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 GINS2Q9Y248 185 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 PCDHB12Q9Y5F1 795 aa11.02□□□□□ -0.65
TPM3-210ENST00000368530 LOXHD1Q8IVV2 1947 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 SMTNL1A8MU46 457 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 IPO5O00410 1097 aaKnown RBP11.01□□□□□ -0.65
TPM3-210ENST00000368530 GPR182O15218 404 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 RPN1P04843 607 aaKnown RBP11.01□□□□□ -0.65
TPM3-210ENST00000368530 TPM4P67936 248 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 PLCB3Q01970 1234 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 MYL5Q02045 173 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 TCF15Q12870 199 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 NCAPHQ15003 741 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 KRT79Q5XKE5 535 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 KLHL10Q6JEL2 608 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 SYCE2Q6PIF2 218 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 MOXD1Q6UVY6 613 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 PLA2G4DQ86XP0 818 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 DRC7Q8IY82 874 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 SMYD4Q8IYR2 804 aaPredicted RBP11.01□□□□□ -0.65
TPM3-210ENST00000368530 TRIML1Q8N9V2 468 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 SPATA20Q8TB22 786 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 MICAL1Q8TDZ2 1067 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 MBOAT7Q96N66 472 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 CASD1Q96PB1 797 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 PNMA5Q96PV4 448 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 CDCA3Q99618 268 aaPredicted RBP11.01□□□□□ -0.65
TPM3-210ENST00000368530 OSMRQ99650 979 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 ADAMTS10Q9H324 1103 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 DACH1Q9UI36 760 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 PCDHA12Q9UN75 941 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 LZTS1Q9Y250 596 aa11.01□□□□□ -0.65
TPM3-210ENST00000368530 FNDC1Q4ZHG4 1894 aaPredicted RBP11.01□□□□□ -0.65
TPM3-210ENST00000368530 DENND3A2RUS2 1198 aa11□□□□□ -0.65
TPM3-210ENST00000368530 BACH1O14867 736 aa11□□□□□ -0.65
TPM3-210ENST00000368530 VTNP04004 478 aa11□□□□□ -0.65
TPM3-210ENST00000368530 IBSPP21815 317 aaPredicted RBP11□□□□□ -0.65
TPM3-210ENST00000368530 CCT6AP40227 531 aaKnown RBP11□□□□□ -0.65
TPM3-210ENST00000368530 PDIA5Q14554 519 aa11□□□□□ -0.65
TPM3-210ENST00000368530 Q4G0T1 1027 aa11□□□□□ -0.65
TPM3-210ENST00000368530 FAM160B1Q5W0V3 765 aa11□□□□□ -0.65
TPM3-210ENST00000368530 NCAPH2Q6IBW4 605 aa11□□□□□ -0.65
TPM3-210ENST00000368530 PDE12Q6L8Q7 609 aaKnown RBP11□□□□□ -0.65
TPM3-210ENST00000368530 MLKLQ8NB16 471 aa11□□□□□ -0.65
TPM3-210ENST00000368530 ETNPPLQ8TBG4 499 aa11□□□□□ -0.65
TPM3-210ENST00000368530 LENG9Q96B70 501 aa11□□□□□ -0.65
TPM3-210ENST00000368530 RPGRIP1Q96KN7 1286 aa11□□□□□ -0.65
TPM3-210ENST00000368530 GSDMAQ96QA5 445 aa11□□□□□ -0.65
TPM3-210ENST00000368530 PPP1R16BQ96T49 567 aa11□□□□□ -0.65
TPM3-210ENST00000368530 KCNMB3Q9NPA1 279 aa11□□□□□ -0.65
TPM3-210ENST00000368530 AAASQ9NRG9 546 aa11□□□□□ -0.65
TPM3-210ENST00000368530 USP34Q70CQ2 3546 aa11□□□□□ -0.65
TPM3-210ENST00000368530 HIDE1A8MVS5 230 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 IKBKBO14920 756 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 MSH4O15457 936 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ZNF862O60290 1169 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 CIITAP33076 1130 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 STX17P56962 302 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 MCM6Q14566 821 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ECM1Q16610 540 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 HSP90AA4PQ58FG1 418 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 ZNF746Q6NUN9 644 aaPredicted RBP10.99□□□□□ -0.65
TPM3-210ENST00000368530 ANKRD54Q6NXT1 300 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 MIS18BP1Q6P0N0 1132 aa10.99□□□□□ -0.65
TPM3-210ENST00000368530 SARM1Q6SZW1 724 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms