RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 LDHAP00338 332 aaKnown RBP11.02□□□□□ -0.65
TPM3-209ENST00000368527 NR3C2P08235 984 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 MYZAPP0CAP1 466 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 POTEJP0CG39 1038 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 ATXN8OSP0DMR3 200 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 MYCLP12524 364 aaPredicted RBP11.02□□□□□ -0.65
TPM3-209ENST00000368527 CTNNA2P26232 953 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 DSG3P32926 999 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 MAN1A1P33908 653 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 NPTX2P47972 431 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 PDE6CP51160 858 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 GCNT1Q02742 428 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 ARHGAP44Q17R89 818 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 XKR3Q5GH77 459 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 NOL9Q5SY16 702 aaKnown RBP11.02□□□□□ -0.65
TPM3-209ENST00000368527 FAM102BQ5T8I3 360 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 SEL1L2Q5TEA6 688 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 AGBL2Q5U5Z8 902 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 SLFN12LQ6IEE8 588 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 GJB7Q6PEY0 223 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 TRIM72Q6ZMU5 477 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 KLHL7Q8IXQ5 586 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 EXOC8Q8IYI6 725 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 C3orf20Q8ND61 904 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 CHST13Q8NET6 341 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 DNERQ8NFT8 737 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 IL31RAQ8NI17 732 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 OLIG1Q8TAK6 271 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 TEX13BQ9BXU2 312 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 GLIS2Q9BZE0 524 aaPredicted RBP11.02□□□□□ -0.65
TPM3-209ENST00000368527 ACAD9Q9H845 621 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 ATP6V0A4Q9HBG4 840 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 SEPT11Q9NVA2 429 aaKnown RBP11.02□□□□□ -0.65
TPM3-209ENST00000368527 TMOD4Q9NZQ9 345 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 CTTNBP2NLQ9P2B4 639 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 FBXO40Q9UH90 709 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 AJAP1Q9UKB5 411 aaPredicted RBP11.02□□□□□ -0.65
TPM3-209ENST00000368527 GTF3C4Q9UKN8 822 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 MYH10P35580 1976 aa11.02□□□□□ -0.65
TPM3-209ENST00000368527 TESPA1A2RU30 521 aaPredicted RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 ZNF233A6NK53 670 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 CCDC169A6NNP5 214 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 SLC16A4O15374 487 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 DDX3YO15523 660 aaKnown RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 FTLP02792 175 aaPredicted RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 CYP1A2P05177 515 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 CNGA1P29973 690 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 ICAM3P32942 547 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 GCLMP48507 274 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 AP3M2P53677 418 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 GYS2P54840 703 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 CDR2Q01850 454 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 PPP3CAQ08209 521 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 MTMR2Q13614 643 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 DNAJC21Q5F1R6 531 aaKnown RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 NSMFQ6X4W1 530 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 SLC30A10Q6XR72 485 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 SYDE1Q6ZW31 735 aaPredicted RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 B4GALNT4Q76KP1 1039 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 DEFB132Q7Z7B7 95 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 GSPT2Q8IYD1 628 aaKnown RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 GPD1LQ8N335 351 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 PARD3BQ8TEW8 1205 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 CEP170P1Q96L14 293 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 ATP6V1G3Q96LB4 118 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 RNPC3Q96LT9 517 aaKnown RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 ZIM3Q96PE6 472 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 MPHOSPH6Q99547 160 aaKnown RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 CBWD1Q9BRT8 395 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 TMEM117Q9H0C3 514 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 JPH1Q9HDC5 661 aaPredicted RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 AVENQ9NQS1 362 aaPredicted RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 RAB20Q9NX57 234 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 SMARCAL1Q9NZC9 954 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 EHD2Q9NZN4 543 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 FEZ2Q9UHY8 353 aaPredicted RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 DOCK1Q14185 1865 aa11.01□□□□□ -0.65
TPM3-209ENST00000368527 ATXN2Q99700 1313 aaKnown RBP11.01□□□□□ -0.65
TPM3-209ENST00000368527 MYH11P35749 1972 aa11□□□□□ -0.65
TPM3-209ENST00000368527 SPATA31C2B4DYI2 1134 aa11□□□□□ -0.65
TPM3-209ENST00000368527 EIF3HO15372 352 aaKnown RBP eCLIP11□□□□□ -0.65
TPM3-209ENST00000368527 EXTL3O43909 919 aa11□□□□□ -0.65
TPM3-209ENST00000368527 PHF2O75151 1096 aa11□□□□□ -0.65
TPM3-209ENST00000368527 CCNE2O96020 404 aa11□□□□□ -0.65
TPM3-209ENST00000368527 PIGRP01833 764 aa11□□□□□ -0.65
TPM3-209ENST00000368527 FGGP02679 453 aa11□□□□□ -0.65
TPM3-209ENST00000368527 RFC5P40937 340 aa11□□□□□ -0.65
TPM3-209ENST00000368527 SLC1A1P43005 524 aa11□□□□□ -0.65
TPM3-209ENST00000368527 FNTAP49354 379 aa11□□□□□ -0.65
TPM3-209ENST00000368527 DNA2P51530 1060 aa11□□□□□ -0.65
TPM3-209ENST00000368527 IRAK1P51617 712 aa11□□□□□ -0.65
TPM3-209ENST00000368527 ERVK-9P63128 1117 aa11□□□□□ -0.65
TPM3-209ENST00000368527 CLDN10P78369 228 aa11□□□□□ -0.65
TPM3-209ENST00000368527 CYP24A1Q07973 514 aa11□□□□□ -0.65
TPM3-209ENST00000368527 STRN3Q13033 797 aa11□□□□□ -0.65
TPM3-209ENST00000368527 SPP2Q13103 211 aa11□□□□□ -0.65
TPM3-209ENST00000368527 BAATQ14032 418 aaPredicted RBP11□□□□□ -0.65
TPM3-209ENST00000368527 SUPT20HL1Q3ZLR7 823 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms