RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TFDP1Q14186 410 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 AMHR2Q16671 573 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 NOTUMQ6P988 496 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 ZBTB33Q86T24 672 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 CABP7Q86V35 215 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 COLGALT2Q8IYK4 626 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 UBALD2Q8IYN6 164 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 MTMR9Q96QG7 549 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 EMILIN2Q9BXX0 1053 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 NFKBIZQ9BYH8 718 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 RNF39Q9H2S5 420 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 MARCH5Q9NX47 278 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 USTQ9Y2C2 406 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 ZDBF2Q9HCK1 2354 aa17.83■□□□□ 0.44
CKS1B-202ENST00000368436 PLXNA3P51805 1871 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 WNT7AO00755 349 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 NEMFO60524 1076 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 NEFLP07196 543 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 CNPP09543 421 aaKnown RBP17.82■□□□□ 0.44
CKS1B-202ENST00000368436 XRCC6P12956 609 aaKnown RBP eCLIP17.82■□□□□ 0.44
CKS1B-202ENST00000368436 RARRES1P49788 294 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 CLCN4P51793 760 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 VCPP55072 806 aaKnown RBP17.82■□□□□ 0.44
CKS1B-202ENST00000368436 MBTD1Q05BQ5 628 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 DSC1Q08554 894 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 TCF15Q12870 199 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 MTMR3Q13615 1198 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 CAPSQ13938 189 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 GPR149Q86SP6 731 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 DIS3L2Q8IYB7 885 aaKnown RBP17.82■□□□□ 0.44
CKS1B-202ENST00000368436 FEZF2Q8TBJ5 459 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 ASAP3Q8TDY4 903 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 CSRNP2Q9H175 543 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 SFXN1Q9H9B4 322 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 MIOSQ9NXC5 875 aa17.82■□□□□ 0.44
CKS1B-202ENST00000368436 ARL5CA6NH57 179 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 INO80B-WBP1J3KQ70 363 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 JAK2O60674 1132 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 BRD1O95696 1058 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 SOD2P04179 222 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 GLRA2P23416 452 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 KLRC2P26717 231 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 AVPR2P30518 371 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 TXKP42681 527 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 NCBP1Q09161 790 aaKnown RBP17.81■□□□□ 0.44
CKS1B-202ENST00000368436 TMC5Q6UXY8 1006 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 RNF168Q8IYW5 571 aaPredicted RBP17.81■□□□□ 0.44
CKS1B-202ENST00000368436 PLCD3Q8N3E9 789 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 TDRD5Q8NAT2 981 aaKnown RBP17.81■□□□□ 0.44
CKS1B-202ENST00000368436 CPB2Q96IY4 423 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 GAD1Q99259 594 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 HERC2P3Q9BVR0 1158 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 MRPL17Q9NRX2 175 aaKnown RBP17.81■□□□□ 0.44
CKS1B-202ENST00000368436 DBR1Q9UK59 544 aaKnown RBP17.81■□□□□ 0.44
CKS1B-202ENST00000368436 HES2Q9Y543 173 aa17.81■□□□□ 0.44
CKS1B-202ENST00000368436 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
CKS1B-202ENST00000368436 ARF4P18085 180 aaPredicted RBP17.8■□□□□ 0.44
CKS1B-202ENST00000368436 PPP4R3CPQ6ZMV5 832 aa17.8■□□□□ 0.44
CKS1B-202ENST00000368436 PHOX2BQ99453 314 aa17.8■□□□□ 0.44
CKS1B-202ENST00000368436 SSX2IPQ9Y2D8 614 aa17.8■□□□□ 0.44
CKS1B-202ENST00000368436 GIT1Q9Y2X7 761 aa17.8■□□□□ 0.44
CKS1B-202ENST00000368436 MTCL1Q9Y4B5 1905 aaKnown RBP17.8■□□□□ 0.44
CKS1B-202ENST00000368436 PDGFBP01127 241 aaPredicted RBP17.79■□□□□ 0.44
CKS1B-202ENST00000368436 SPATA31C1P0DKV0 1188 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 MLH1P40692 756 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 OR1G1P47890 313 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 NEK4P51957 841 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 NUBP1P53384 320 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 ST3GAL1Q11201 340 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 TRIM29Q14134 588 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 KIAA0319Q5VV43 1072 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 GSTCDQ8NEC7 633 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 PIGOQ8TEQ8 1089 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 ZFP42Q96MM3 310 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 RPS6KC1Q96S38 1066 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 TMEM60Q9H2L4 133 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 PPP4R2Q9NY27 417 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 LIMD1Q9UGP4 676 aa17.79■□□□□ 0.44
CKS1B-202ENST00000368436 PRG3Q9Y2Y8 225 aaPredicted RBP17.79■□□□□ 0.44
CKS1B-202ENST00000368436 A0A087WWV3 80 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 A0A1B0GUA9 196 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 POTEMA6NI47 508 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 URODP06132 367 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 ASGR2P07307 311 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 SCNN1GP51170 649 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 C15orf39Q6ZRI6 1047 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 HACE1Q8IYU2 909 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 CMASQ8NFW8 434 aaPredicted RBP17.78■□□□□ 0.44
CKS1B-202ENST00000368436 CCDC43Q96MW1 224 aaKnown RBP17.78■□□□□ 0.44
CKS1B-202ENST00000368436 POLR3FQ9H1D9 316 aaPredicted RBP17.78■□□□□ 0.44
CKS1B-202ENST00000368436 SMOC2Q9H3U7 446 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 NXF3Q9H4D5 531 aaKnown RBP17.78■□□□□ 0.44
CKS1B-202ENST00000368436 RXFP1Q9HBX9 757 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 ZMYM2Q9UBW7 1377 aa17.78■□□□□ 0.44
CKS1B-202ENST00000368436 C2CD2LO14523 706 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 TEX28O15482 410 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 B4GALT5O43286 388 aa17.77■□□□□ 0.44
CKS1B-202ENST00000368436 EIF5BO60841 1220 aaKnown RBP17.77■□□□□ 0.44
CKS1B-202ENST00000368436 GLUD2P49448 558 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms