RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 IDEP14735 1019 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 MYOGP15173 224 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 EHHADHQ08426 723 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 SNW1Q13573 536 aaKnown RBP20.53■□□□□ 0.88
LMNA-204ENST00000368298 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 RSPH1Q8WYR4 309 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 TIFAQ96CG3 184 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 ACO2Q99798 780 aaKnown RBP20.53■□□□□ 0.88
LMNA-204ENST00000368298 MRPL4Q9BYD3 311 aaKnown RBP20.53■□□□□ 0.88
LMNA-204ENST00000368298 PDZD7Q9H5P4 517 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 PTPRHQ9HD43 1115 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 TNFSF13BQ9Y275 285 aa20.53■□□□□ 0.88
LMNA-204ENST00000368298 HOXA2O43364 376 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 PPP1R37O75864 691 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 MBD3O95983 291 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 AFMP43652 599 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 FAM160A1Q05DH4 1040 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 STRN3Q13033 797 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 HERC4Q5GLZ8 1057 aaPredicted RBP20.52■□□□□ 0.88
LMNA-204ENST00000368298 ATF7IP2Q5U623 682 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 ZPBP2Q6X784 338 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 UNC13DQ70J99 1090 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 YME1L1Q96TA2 773 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 RNF19AQ9NV58 838 aa20.52■□□□□ 0.88
LMNA-204ENST00000368298 FNDC1Q4ZHG4 1894 aaPredicted RBP20.51■□□□□ 0.87
LMNA-204ENST00000368298 K7ENM7 598 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 PIGRP01833 764 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 CA3P07451 260 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 PROZP22891 400 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 NMT1P30419 496 aaKnown RBP20.51■□□□□ 0.87
LMNA-204ENST00000368298 ASIC1P78348 528 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 CUL4BQ13620 913 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 KANK3Q6NY19 840 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 CMTR2Q8IYT2 770 aaKnown RBP20.51■□□□□ 0.87
LMNA-204ENST00000368298 SMG8Q8ND04 991 aaKnown RBP20.51■□□□□ 0.87
LMNA-204ENST00000368298 HVCN1Q96D96 273 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 PGBD4Q96DM1 585 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 EIF2AQ9BY44 585 aaKnown RBP20.51■□□□□ 0.87
LMNA-204ENST00000368298 NKX2-4Q9H2Z4 354 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 SLC28A3Q9HAS3 691 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 TBX20Q9UMR3 447 aa20.51■□□□□ 0.87
LMNA-204ENST00000368298 LCHNA4D1U4 455 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 LIG1P18858 919 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 COASYQ13057 564 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 CAVIN1Q6NZI2 390 aaKnown RBP20.5■□□□□ 0.87
LMNA-204ENST00000368298 GRAMD1CQ8IYS0 662 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 TIGD1Q96MW7 591 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 TARS2Q9BW92 718 aaKnown RBP20.5■□□□□ 0.87
LMNA-204ENST00000368298 TMEM117Q9H0C3 514 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 BLZF1Q9H2G9 400 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 MRPL44Q9H9J2 332 aaKnown RBP20.5■□□□□ 0.87
LMNA-204ENST00000368298 USP20Q9Y2K6 914 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 IPPQ9Y573 584 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 ABLIM1O14639 778 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 GTPBP6O43824 516 aaPredicted RBP20.5■□□□□ 0.87
LMNA-204ENST00000368298 GADD45BO75293 160 aaPredicted RBP20.5■□□□□ 0.87
LMNA-204ENST00000368298 FGFR1P11362 822 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 CASP1P29466 404 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 TAP1Q03518 808 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 ALCAMQ13740 583 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 DCAF4L1Q3SXM0 396 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 TPRNQ4KMQ1 711 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 EEF1DP3Q658K8 133 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 AGMOQ6ZNB7 445 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 CDR2LQ86X02 465 aaPredicted RBP20.5■□□□□ 0.87
LMNA-204ENST00000368298 MAP4K3Q8IVH8 894 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 ELOA2Q8IYF1 753 aaPredicted RBP20.5■□□□□ 0.87
LMNA-204ENST00000368298 CASD1Q96PB1 797 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 ADPGKQ9BRR6 497 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 UBN1Q9NPG3 1134 aa20.5■□□□□ 0.87
LMNA-204ENST00000368298 ZMYM2Q9UBW7 1377 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 LINC01553A4QN01 128 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 INPPL1O15357 1258 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 KLRC4O43908 158 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 TOM1L1O75674 476 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 ARHGEF15O94989 841 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 LINC00271P0C7V0 271 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 UBE2HP62256 183 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 ZC2HC1CQ53FD0 456 aaPredicted RBP20.49■□□□□ 0.87
LMNA-204ENST00000368298 CLLU1OSQ5K130 101 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 APBB1IPQ7Z5R6 666 aaPredicted RBP20.49■□□□□ 0.87
LMNA-204ENST00000368298 CLP1Q92989 425 aaKnown RBP20.49■□□□□ 0.87
LMNA-204ENST00000368298 CCDC34Q96HJ3 373 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 TRIM6Q9C030 488 aaPredicted RBP20.49■□□□□ 0.87
LMNA-204ENST00000368298 ZNF576Q9H609 170 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 PCDHB13Q9Y5F0 798 aa20.49■□□□□ 0.87
LMNA-204ENST00000368298 NPTXRO95502 500 aa20.48■□□□□ 0.87
LMNA-204ENST00000368298 GATMP50440 423 aa20.48■□□□□ 0.87
LMNA-204ENST00000368298 TMEM132AQ24JP5 1023 aa20.48■□□□□ 0.87
LMNA-204ENST00000368298 PPP2R2DQ66LE6 453 aa20.48■□□□□ 0.87
LMNA-204ENST00000368298 MPZL3Q6UWV2 235 aa20.48■□□□□ 0.87
LMNA-204ENST00000368298 TTYH1Q9H313 450 aaPredicted RBP20.48■□□□□ 0.87
LMNA-204ENST00000368298 CHD9Q3L8U1 2897 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 GOLGA6L3A6NEY3 463 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 MEIS3P2A8K0S8 358 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 NR1I2O75469 434 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 OFD1O75665 1012 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 MCF2P10911 925 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 ITGA4P13612 1032 aa20.47■□□□□ 0.87
LMNA-204ENST00000368298 ERVK-21P61565 698 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms