RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 DOCK2Q92608 1830 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 MROH5Q6ZUA9 1318 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 STK36Q9NRP7 1315 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 SYNRGQ9UMZ2 1314 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 FAM237AA0A1B0GTK4 181 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 ARVCFO00192 962 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 CPLX1O14810 134 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 IKBKBO14920 756 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 ENTPD3O75355 529 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 ECEL1O95672 775 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 DLGAP3O95886 979 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 PCP11498 1178 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 TCF3P15923 654 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 PRDX5P30044 214 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 CAP2P40123 477 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 LIFRP42702 1097 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 TIMM10P62072 90 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 LMNB2Q03252 620 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 SOX4Q06945 474 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 STK3Q13188 491 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 IQCB1Q15051 598 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 SF3A1Q15459 793 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 SMAD2Q15796 467 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 STOX1Q6ZVD7 989 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 RNF180Q86T96 592 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 HERC6Q8IVU3 1022 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 DRC7Q8IY82 874 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 MB21D2Q8IYB1 491 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 TMEM105Q8N8V8 129 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 SLC43A3Q8NBI5 491 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 PHC3Q8NDX5 983 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 GRIN3AQ8TCU5 1115 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 GPBAR1Q8TDU6 330 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 TBC1D22AQ8WUA7 517 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 C8orf76Q96K31 380 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 FEZ1Q99689 392 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 OSBPL5Q9H0X9 879 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 TTC12Q9H892 705 aaPredicted RBP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 CACNA2D2Q9NY47 1150 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 CLIP2Q9UDT6 1046 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 NID2Q14112 1375 aa7.31□□□□□ -1.24
ECHDC1-202ENST00000368289 CFAP46Q8IYW2 2715 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 TNKSO95271 1327 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 CCDC196A0A1B0GTZ2 297 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 MINDY4BA8MYZ0 360 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 CBFA2T2O43439 604 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 GAS2O43903 313 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 ZNF862O60290 1169 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 JAK2O60674 1132 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 CTDNEP1O95476 244 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 IGHA1P01876 353 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 FGAP02671 866 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 RARBP10826 455 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 ME1P48163 572 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 FAM193AP78312 1265 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 APOBRQ0VD83 1088 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 SNW1Q13573 536 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 STK38Q15208 465 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 WDR78Q5VTH9 848 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 CCDC186Q7Z3E2 898 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 SGMS1Q86VZ5 419 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 TRIM42Q8IWZ5 723 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 LINC00301Q8NCQ3 95 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 CCDC150Q8NCX0 1101 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 MAML3Q96JK9 1138 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 SDF4Q9BRK5 362 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 CCDC94Q9BW85 323 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 YIPF2Q9BWQ6 316 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 KRT23Q9C075 422 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 IRF2BPLQ9H1B7 796 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 MTIF3Q9H2K0 278 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 HIPK3Q9H422 1215 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 KBTBD4Q9NVX7 518 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 HIF3AQ9Y2N7 669 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 SUGT1Q9Y2Z0 365 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 PTPRSQ13332 1948 aa7.3□□□□□ -1.24
ECHDC1-202ENST00000368289 SPTLC2O15270 562 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 PRC1O43663 620 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 PDE8BO95263 885 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 TFE3P19532 575 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 ADD2P35612 726 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 ID3Q02535 119 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 CAMK2GQ13555 558 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 TRIM29Q14134 588 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 SLC39A14Q15043 492 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 CAMK4Q16566 473 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 ATP2B3Q16720 1220 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 LRRC24Q50LG9 513 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 LDHAL6AQ6ZMR3 332 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 DPP9Q86TI2 863 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 LUZP1Q86V48 1076 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 LRRC8AQ8IWT6 810 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 CKAP2LQ8IYA6 745 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 SMAP1Q8IYB5 467 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 VGLL2Q8N8G2 317 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 CCDC112Q8NEF3 446 aa7.29□□□□□ -1.24
ECHDC1-202ENST00000368289 LPIN2Q92539 896 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms