RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 RNF225M0QZC1 329 aaPredicted RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 PGK1P00558 417 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 HSPA6P17066 643 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 SCP2P22307 547 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 RPL13P26373 211 aaKnown RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 CNGA1P29973 690 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 MTIF2P46199 727 aaKnown RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 MXD4Q14582 209 aaPredicted RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 PPP2R5AQ15172 486 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 MAN2A1Q16706 1144 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 KIAA0753Q2KHM9 967 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 FILIP1LQ4L180 1135 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 SPECC1LQ69YQ0 1117 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 DPY19L2P1Q6NXN4 242 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 HS2ST1Q7LGA3 356 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 CREBRFQ8IUR6 639 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 DRC7Q8IY82 874 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 SYCP3Q8IZU3 236 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 ANKRD20A12PQ8NF67 263 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 CACTINQ8WUQ7 758 aaKnown RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 LMBR1Q8WVP7 490 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 PSPC1Q8WXF1 523 aaKnown RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 ZNF830Q96NB3 372 aaPredicted RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 MKNK1Q9BUB5 465 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 NOC4LQ9BVI4 516 aaKnown RBP10.39□□□□□ -0.75
VTA1-201ENST00000367621 NDST4Q9H3R1 872 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 IMPACTQ9P2X3 320 aa10.39□□□□□ -0.75
VTA1-201ENST00000367621 ITIH6Q6UXX5 1313 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 LRRIQ4A6NIV6 560 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 RNF223E7ERA6 249 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 ABLIM1O14639 778 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 ASAP2O43150 1006 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 MSCO60682 206 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 RARBP10826 455 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 CST5P28325 142 aaPredicted RBP10.38□□□□□ -0.75
VTA1-201ENST00000367621 PSMC2P35998 433 aaKnown RBP10.38□□□□□ -0.75
VTA1-201ENST00000367621 SLC19A1P41440 591 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 KLK7P49862 253 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 DNM2P50570 870 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 CYP2J2P51589 502 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 PTENP60484 403 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 ZNF200P98182 395 aaPredicted RBP10.38□□□□□ -0.75
VTA1-201ENST00000367621 UBXN1Q04323 297 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 POU5F1BQ06416 359 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 GOLGA8FQ08AF8 430 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 GOLGA8DPQ0D2H9 430 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 KCNMA1Q12791 1236 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 CCDC40Q4G0X9 1142 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 BRDTQ58F21 947 aaPredicted RBP10.38□□□□□ -0.75
VTA1-201ENST00000367621 C1orf220Q5T0J3 134 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 RUFY4Q6ZNE9 571 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 CCDC155Q8N6L0 562 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 METTL13Q8N6R0 699 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 DNAJC5GQ8N7S2 189 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 RNF149Q8NC42 400 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 DEPTORQ8TB45 409 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 PLEKHO2Q8TD55 490 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 SLC35C1Q96A29 364 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 FBXL18Q96ME1 805 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 ERGIC2Q96RQ1 377 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 NFKBIZQ9BYH8 718 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 ADAMTS10Q9H324 1103 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 FZD8Q9H461 694 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 PCIF1Q9H4Z3 704 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 MINDY3Q9H8M7 445 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 IFT122Q9HBG6 1241 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 HSPBP1Q9NZL4 362 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 EXOC7Q9UPT5 735 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 SIK3Q9Y2K2 1263 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 PCDHB3Q9Y5E6 796 aa10.38□□□□□ -0.75
VTA1-201ENST00000367621 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
VTA1-201ENST00000367621 GRIN2DO15399 1336 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 NRCAMQ92823 1304 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 K7ERI5 159 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 MAPK13O15264 365 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 KPNA6O60684 536 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 GYPCP04921 128 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 INHAP05111 366 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 TPM3P06753 285 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 ADRB2P07550 413 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 C6orf222P0C671 652 aaPredicted RBP10.37□□□□□ -0.75
VTA1-201ENST00000367621 IQCF3P0C7M6 154 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 SRGAP2CP0DJJ0 459 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 GARTP22102 1010 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 ABCD1P33897 745 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 EFNA5P52803 228 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 PRMT2P55345 433 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 PRR20EP86478 221 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 PRR20CP86479 221 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 PRR20DP86480 221 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 PRR20BP86481 221 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 PRR20AP86496 221 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 MAP2K1Q02750 393 aaPredicted RBP10.37□□□□□ -0.75
VTA1-201ENST00000367621 MBTD1Q05BQ5 628 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 LRMPQ12912 555 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 SYCP1Q15431 976 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 AMHR2Q16671 573 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 GNASQ5JWF2 1037 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 NFRKBQ6P4R8 1299 aa10.37□□□□□ -0.75
VTA1-201ENST00000367621 RHPN2Q8IUC4 686 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms