RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 C6orf10Q5SRN2 563 aa11.12□□□□□ -0.63
SCAF8-202ENST00000367186 FAM102AQ5T9C2 384 aaPredicted RBP11.12□□□□□ -0.63
SCAF8-202ENST00000367186 SWSAP1Q6NVH7 229 aa11.12□□□□□ -0.63
SCAF8-202ENST00000367186 DDX42Q86XP3 938 aaKnown RBP eCLIP11.12□□□□□ -0.63
SCAF8-202ENST00000367186 RHPN2Q8IUC4 686 aa11.12□□□□□ -0.63
SCAF8-202ENST00000367186 KLC4Q9NSK0 619 aa11.12□□□□□ -0.63
SCAF8-202ENST00000367186 LOC100653049A0A140TA62 436 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 C21orf2O43822 256 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 KRT34O76011 436 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 TCN1P20061 433 aaPredicted RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 PCYT1AP49585 367 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 PAPOLAP51003 745 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ALDH18A1P54886 795 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 CUL3Q13618 768 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 FSCBQ5H9T9 825 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 HEATR6Q6AI08 1181 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 IL31Q6EBC2 164 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 PPP4R3CPQ6ZMV5 832 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 DHX38Q92620 1227 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 RNPC3Q96LT9 517 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 DHX36Q9H2U1 1008 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ABCB11O95342 1321 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 CYP26A1O43174 497 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 PPP1R37O75864 691 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ENO1P06733 434 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ADORA2BP29275 332 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 BTKQ06187 659 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 SPP2Q13103 211 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 RASSF3Q86WH2 238 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 AGPAT5Q9NUQ2 364 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 IQGAP3Q86VI3 1631 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 KCNA2P16389 499 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ANXA13P27216 316 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 NMT1P30419 496 aaKnown RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 PGM1P36871 562 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 KCNJ1P48048 391 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ARSEP51690 589 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 VAMP7P51809 220 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 PFKFB3Q16875 520 aaPredicted RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 E4F1Q66K89 784 aaPredicted RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 LRRC8EQ6NSJ5 796 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 NUP93Q8N1F7 819 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 FAM81BQ96LP2 452 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 CASS4Q9NQ75 786 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 EMSYQ7Z589 1322 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 MYOM2P54296 1465 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ZBTB5O15062 677 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 APRTP07741 180 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 GNA15P30679 374 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 SKOR1P84550 965 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 SCARF1Q14162 830 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 SUPT20HL1Q3ZLR7 823 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 TJAP1Q5JTD0 557 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ANKRD40Q6AI12 368 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 ANO5Q75V66 913 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 COG4Q9H9E3 785 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 FAM217BQ9NTX9 383 aaPredicted RBP11.11□□□□□ -0.63
SCAF8-202ENST00000367186 GABBR1Q9UBS5 961 aa11.11□□□□□ -0.63
SCAF8-202ENST00000367186 KPNA7A9QM74 516 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 FXR1P51114 621 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 LONRF1Q17RB8 773 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 SLFN12LQ6IEE8 588 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 SMIM5Q71RC9 77 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 CLEC10AQ8IUN9 316 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 LZICQ8WZA0 190 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 CELF1Q92879 486 aaKnown RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 PRMT1Q99873 361 aaKnown RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 SHCBP1LQ9BZQ2 653 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 STRIP2Q9ULQ0 834 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 AARSP49588 968 aaKnown RBP eCLIP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 EFTUD2Q15029 972 aaKnown RBP eCLIP11.1□□□□□ -0.634e-11■■■■■ 57.9
SCAF8-202ENST00000367186 ACBD5Q5T8D3 534 aaPredicted RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 BZW1Q7L1Q6 419 aaKnown RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 DCP1AQ9NPI6 582 aaPredicted RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 NPHP3-ACAD11A0A0J9YXS1 232 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 MMP10P09238 476 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 NLRP11P59045 1033 aaKnown RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 GPSM2P81274 684 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 PRDM5Q9NQX1 630 aaPredicted RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 PNMA2Q9UL42 364 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 ZNF521Q96K83 1311 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 BCORL1Q5H9F3 1711 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 HUS1O60921 280 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 ENO3P13929 434 aaPredicted RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 COPB2P35606 906 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 RECQLP46063 649 aaPredicted RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 AP2B1P63010 937 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 ACCSLQ4AC99 568 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 THEMIS2Q5TEJ8 643 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 DHX40Q8IX18 779 aaKnown RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 SCG3Q8WXD2 468 aaKnown RBP11.1□□□□□ -0.63
SCAF8-202ENST00000367186 RAD54LQ92698 747 aa11.1□□□□□ -0.63
SCAF8-202ENST00000367186 PDLIM2Q96JY6 352 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms