RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZWILCHQ9H900 591 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 M0R2C6 588 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 HSPA4LO95757 839 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 CDC25AP30304 524 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 GPR162Q16538 588 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 IMPG1Q17R60 797 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 NOS1P29475 1434 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 HIBADHP31937 336 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 STK4Q13043 487 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 SOX11P35716 441 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 GCLCP48506 637 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 FAM47AQ5JRC9 791 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 MCRS1Q96EZ8 462 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 TTC25Q96NG3 672 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZNF184Q99676 751 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 PRKAG2Q9UGJ0 569 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 V9GYQ6 96 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 A8MUI8 341 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 RWDD4Q6NW29 188 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 LLGL2Q6P1M3 1020 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 RNF139Q8WU17 664 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 HNRNPLLQ8WVV9 542 aaKnown RBP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 SHCBP1LQ9BZQ2 653 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 RNF14Q9UBS8 474 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 F8VZ95 297 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 KRT36O76013 467 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 C21orf59P57076 290 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 RNF220Q5VTB9 566 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 MYOCDQ8IZQ8 938 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 CALN1Q9BXU9 219 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 SLC8A2Q9UPR5 921 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 LAMC1P11047 1609 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
CDC42BPA-205ENST00000366769 EPHB2P29323 1055 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 AGBL2Q5U5Z8 902 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC53A6NM62 1247 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 POTEIP0CG38 1075 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 BRAFP15056 766 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZC3H15Q8WU90 426 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 DPF2Q92785 391 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 PHF21AQ96BD5 680 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 CAAP1Q9H8G2 361 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 DNAAF2Q9NVR5 837 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZMYND8Q9ULU4 1186 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 KIF24Q5T7B8 1368 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCDC88AQ3V6T2 1871 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 PLXNC1O60486 1568 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 KRT1P04264 644 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 DEFA1P59665 94 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 DEFA3P59666 94 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 RAB14P61106 215 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 NCAPG2Q86XI2 1143 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 CCSER2Q9H7U1 834 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 GALNT8Q9NY28 637 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 STK32BQ9NY57 414 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 AP4S1Q9Y587 144 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 H0YIN7 160 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 GPAA1O43292 621 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 NFKBIAP25963 317 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 PDAP1Q13442 181 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 LVRNQ6Q4G3 990 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 PDCD6IPQ8WUM4 868 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 ATAD3AQ9NVI7 634 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 COPG1Q9Y678 874 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 KDM3AQ9Y4C1 1321 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 KNTC1P50748 2209 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 IQGAP2Q13576 1575 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 TCN1P20061 433 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 TMEM63BQ5T3F8 832 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 NEK10Q6ZWH5 1172 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 PIGOQ8TEQ8 1089 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 EDEM3Q9BZQ6 932 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 DNMT1P26358 1616 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 MYL7Q01449 175 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 LRRC74BQ6ZQY2 392 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 CABLES1Q8TDN4 633 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 MAML3Q96JK9 1138 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 PPP1R16BQ96T49 567 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 SARS2Q9NP81 518 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 HERC5Q9UII4 1024 aaKnown RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 FANCD2Q9BXW9 1451 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 TROQ12816 1431 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 ANO9A1A5B4 782 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 COPEO14579 308 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 STX3Q13277 289 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 RNF219Q5W0B1 726 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 SEPT9Q9UHD8 586 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 TTC7AQ9ULT0 858 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 CARD8Q9Y2G2 431 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 SYNJ2O15056 1496 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 BTN3A3O00478 584 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 NEMP1O14524 444 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 ERICH1Q86X53 443 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 MTBPQ96DY7 904 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 RCOR1Q9UKL0 485 aa11.69□□□□□ -0.54
CDC42BPA-205ENST00000366769 SMCO2A6NFE2 343 aa11.68□□□□□ -0.54
CDC42BPA-205ENST00000366769 TBC1D9BQ66K14 1250 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms