RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 CLDND1Q9NY35 253 aa10.27□□□□□ -0.77
MRPL55-216ENST00000366744 LARSQ9P2J5 1176 aaKnown RBP10.27□□□□□ -0.77
MRPL55-216ENST00000366744 RBM19Q9Y4C8 960 aaKnown RBP10.27□□□□□ -0.77
MRPL55-216ENST00000366744 BDP1A6H8Y1 2624 aa10.27□□□□□ -0.77
MRPL55-216ENST00000366744 XIRP2A4UGR9 3374 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 A0A1B0GUA9 196 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 ACKR2O00590 384 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 FAM13AO94988 1023 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 PLCG1P19174 1290 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 SCP2P22307 547 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 MARCKSP29966 332 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 HOXA11P31270 313 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 ABCD1P33897 745 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 PBX3P40426 434 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 MLH1P40692 756 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 NDUFV1P49821 464 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 BCAR1P56945 870 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 RAD51AP2Q09MP3 1159 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 DHX8Q14562 1220 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 ZNF568Q3ZCX4 644 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 RINT1Q6NUQ1 792 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 MRPL10Q7Z7H8 261 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 SYT2Q8N9I0 419 aaPredicted RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 LARP4BQ92615 738 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 PABPC5Q96DU9 382 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 BICD1Q96G01 975 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 TCF25Q9BQ70 676 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 MMTAG2Q9BU76 263 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 KIFC3Q9BVG8 833 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 EIF2AQ9BY44 585 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 MRPL4Q9BYD3 311 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 NXF3Q9H4D5 531 aaKnown RBP10.26□□□□□ -0.77
MRPL55-216ENST00000366744 ZHX3Q9H4I2 956 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 CWH43Q9H720 699 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 RNF19AQ9NV58 838 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 HCSTQ9UBK5 93 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 STK17AQ9UEE5 414 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 PARP2Q9UGN5 583 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 ODF2LQ9ULJ1 636 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 CLIC4Q9Y696 253 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 VCANP13611 3396 aa10.26□□□□□ -0.77
MRPL55-216ENST00000366744 ARL5CA6NH57 179 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 K7ENM7 598 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 DLL1O00548 723 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 OFD1O75665 1012 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 POMCP01189 267 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 ZSCAN22P10073 491 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 PLS3P13797 630 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 STAT6P42226 847 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 MATR3P43243 847 aaKnown RBP eCLIP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 NPTX2P47972 431 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 NRIP1P48552 1158 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 YARSP54577 528 aaKnown RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 SLC12A3P55017 1021 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 TFF2Q03403 129 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 GRIK3Q13003 919 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 SMC1AQ14683 1233 aaKnown RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 KARSQ15046 597 aaKnown RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 AMHR2Q16671 573 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 PUS10Q3MIT2 529 aaKnown RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 UBXN11Q5T124 520 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 ATF7IP2Q5U623 682 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 PLPP4Q5VZY2 271 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 CCDC73Q6ZRK6 1079 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 TMC7Q7Z402 723 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 KCNK18Q7Z418 384 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 SLC39A11Q8N1S5 342 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 SPPL3Q8TCT6 385 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 ADAMTS19Q8TE59 1207 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 FOXD4L4Q8WXT5 416 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 RAD54LQ92698 747 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 PNMA5Q96PV4 448 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 CDCA3Q99618 268 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 TMEM175Q9BSA9 504 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 TCHPQ9BT92 498 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 CCDC94Q9BW85 323 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 CCDC113Q9H0I3 377 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 FZD8Q9H461 694 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 PDZD7Q9H5P4 517 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 IGFLR1Q9H665 355 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 TLE6Q9H808 572 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 NGRNQ9NPE2 291 aaKnown RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 TOPORSQ9NS56 1045 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 ANKFY1Q9P2R3 1169 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 GIT1Q9Y2X7 761 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 HES2Q9Y543 173 aa10.25□□□□□ -0.77
MRPL55-216ENST00000366744 SRPRBQ9Y5M8 271 aaKnown RBP10.25□□□□□ -0.77
MRPL55-216ENST00000366744 SPDYE4A6NLX3 237 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 SLC16A4O15374 487 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 YEATS4O95619 227 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 F13A1P00488 732 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 NASPP49321 788 aaPredicted RBP10.24□□□□□ -0.77
MRPL55-216ENST00000366744 SCNN1GP51170 649 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 GIT2Q14161 759 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 SLC39A14Q15043 492 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 PTPAQ15257 358 aa10.24□□□□□ -0.77
MRPL55-216ENST00000366744 RRAGBQ5VZM2 374 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms