RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CDC14CA4D256 554 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 MAP2K7O14733 419 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 TFRCP02786 760 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 HNRNPH3P31942 346 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 FOXR2Q6PJQ5 311 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 CCDC170Q8IYT3 715 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 RAD54LQ92698 747 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 EEF2KMTQ96G04 330 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 FGD4Q96M96 766 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 MPHOSPH6Q99547 160 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 SLC39A2Q9NP94 309 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 CHST12Q9NRB3 414 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 ZHX1Q9UKY1 873 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 MYO6Q9UM54 1294 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PCDHGC4Q9Y5F7 938 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 ANKRD31Q8N7Z5 1873 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 ABCB11O95342 1321 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 EIF3CLB5ME19 914 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 TRIM21P19474 475 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 KRT83P78385 493 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PABPC4Q13310 644 aaKnown RBP eCLIP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 LONRF2Q1L5Z9 754 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 TMEM266Q2M3C6 531 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 MAP9Q49MG5 647 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 ARSHQ5FYA8 562 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PERM1Q5SV97 790 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 BEND6Q5SZJ8 279 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 SYT9Q86SS6 491 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PDZD3Q86UT5 571 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 GUF1Q8N442 669 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 HAS1Q92839 578 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 IQCDQ96DY2 449 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PNKPQ96T60 521 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 EIF3CQ99613 913 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 NHEJ1Q9H9Q4 299 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 APEX2Q9UBZ4 518 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 SHTN1A0MZ66 631 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PES1O00541 588 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PAPD7Q5XG87 772 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 APOBEC3HQ6NTF7 200 aaKnown RBP8.05□□□□□ -1.12
CLCN3-202ENST00000360642 LRFN4Q6PJG9 635 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 HHIPL2Q6UWX4 724 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 UNC5AQ6ZN44 842 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 KCNK18Q7Z418 384 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 C14orf80Q86SX3 495 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 ADCY4Q8NFM4 1077 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 BSNDQ8WZ55 320 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 PKNOX2Q96KN3 472 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 RAB34Q9BZG1 259 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 USP40Q9NVE5 1235 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 GUCA1BQ9UMX6 200 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 SIK3Q9Y2K2 1263 aa8.05□□□□□ -1.12
CLCN3-202ENST00000360642 NRXN2Q9P2S2 1712 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CTAGE15A4D2H0 777 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 GHRHP01286 108 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CTAGE8P0CG41 777 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 SLURP2P0DP57 97 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 GUCY2CP25092 1073 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 MTIF2P46199 727 aaKnown RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 RAB27AP51159 221 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 LRRC63Q05C16 580 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 COL9A2Q14055 689 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 VWA3BQ502W6 1294 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 HYIQ5T013 277 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 GPATCH4Q5T3I0 446 aaKnown RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CDC42EP5Q6NZY7 148 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CTAGE6Q86UF2 777 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CTAGE4Q8IX94 777 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 MSL3Q8N5Y2 521 aaKnown RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 AFF2P51816 1311 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 F8W031 263 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 ZBTB5O15062 677 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 B3GALT4O96024 378 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CYLC1P35663 651 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 GSTM4Q03013 218 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 CCDC122Q5T0U0 273 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 LRRC55Q6ZSA7 311 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 ZNF771Q7L3S4 317 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 TMEM102Q8N9M5 508 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-202ENST00000360642 MXD3Q9BW11 206 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 LRRC27Q9C0I9 530 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 TFR2Q9UP52 801 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 PLAGL2Q9UPG8 496 aa8.04□□□□□ -1.12
CLCN3-202ENST00000360642 ADAMTSL1Q8N6G6 1762 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 SMC1AQ14683 1233 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 SF1Q15637 639 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 UBE2SQ16763 222 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 FKBP15Q5T1M5 1219 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 KRT79Q5XKE5 535 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 DYMQ7RTS9 669 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 CUL5Q93034 780 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 DNAJC19Q96DA6 116 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 TRIM8Q9BZR9 551 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 NDST4Q9H3R1 872 aa8.03□□□□□ -1.12
CLCN3-202ENST00000360642 ZNHIT6Q9NWK9 470 aaKnown RBP8.03□□□□□ -1.12
CLCN3-202ENST00000360642 DDX25Q9UHL0 483 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms