RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 HOXD10P28358 340 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 PI4K2BQ8TCG2 481 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 EIF2B2P49770 351 aaKnown RBP13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 LRRC41Q15345 812 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 SFR1Q86XK3 245 aa13.96□□□□□ -0.17
SRGAP3-201ENST00000360413 DHX36Q9H2U1 1008 aaKnown RBP13.96□□□□□ -0.18
SRGAP3-201ENST00000360413 ZAP70P43403 619 aa13.96□□□□□ -0.18
SRGAP3-201ENST00000360413 ZCWPW2Q504Y3 356 aa13.96□□□□□ -0.18
SRGAP3-201ENST00000360413 TRIM69Q86WT6 500 aa13.96□□□□□ -0.18
SRGAP3-201ENST00000360413 MAPKAPK5Q8IW41 473 aa13.96□□□□□ -0.18
SRGAP3-201ENST00000360413 CCNYL1Q8N7R7 359 aa13.96□□□□□ -0.18
SRGAP3-201ENST00000360413 ZWILCHQ9H900 591 aa13.96□□□□□ -0.18
SRGAP3-201ENST00000360413 IMPDH2P12268 514 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 SMARCAD1Q9H4L7 1026 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 HDAC6Q9UBN7 1215 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 ADAMTS1Q9UHI8 967 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 TSPOAP1O95153 1857 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 UGGT2Q9NYU1 1516 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 MAGEA13PA6NCF6 341 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 RMDN1Q96DB5 314 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 THTPAQ9BU02 230 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 MXD3Q9BW11 206 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 VHLP40337 213 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 JAK3P52333 1124 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 RPS8P62241 208 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 RPS6P62753 249 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 ALKBH5Q6P6C2 394 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 FAM180AQ6UWF9 173 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 SH3KBP1Q96B97 665 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 MTERF3Q96E29 417 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 PPP1R36Q96LQ0 422 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 KLHL31Q9H511 634 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 CLIC2O15247 247 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 STRNO43815 780 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 FAM107AO95990 144 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 TAP1Q03518 808 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 LVRNQ6Q4G3 990 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 PSD3Q9NYI0 1048 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 TP53BP2Q13625 1128 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 APPL2Q8NEU8 664 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 NDST4Q9H3R1 872 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 ZMYND8Q9ULU4 1186 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 ATP5JP18859 108 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 MTIF3Q9H2K0 278 aaKnown RBP13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 NOD2Q9HC29 1040 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 MARK3P27448 753 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 CYP4A11Q02928 519 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 POLA2Q14181 598 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 TRIP10Q15642 601 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 POTEAQ6S8J7 498 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 KIF2BQ8N4N8 673 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 USE1Q9NZ43 259 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 CLCA2Q9UQC9 943 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 UHRF1BP1Q6BDS2 1440 aa13.95□□□□□ -0.18
SRGAP3-201ENST00000360413 ANO9A1A5B4 782 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 SYNDIG1LA6NDD5 238 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 LSP1P33241 339 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 ANTXR1Q9H6X2 564 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 MAP3K20Q9NYL2 800 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 FBXL5Q9UKA1 691 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 STAP1Q9ULZ2 295 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 SOX13Q9UN79 622 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 MIF4GDA9UHW6 222 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 CHN1P15882 459 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 AASDHQ4L235 1098 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 AGR3Q8TD06 166 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 TMA16Q96EY4 203 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 GOLPH3LQ9H4A5 285 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 IL1RAPL1Q9NZN1 696 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 KANSL2Q9H9L4 492 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 TTC7AQ9ULT0 858 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 USP27XA6NNY8 438 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 ZNF839A8K0R7 811 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 RWDD4Q6NW29 188 aaKnown RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 ASNSD1Q9NWL6 643 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 GRIN2AQ12879 1464 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 C5orf58C9J3I9 102 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 ACADSP16219 412 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 ARHGAP22Q7Z5H3 698 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 SNF8Q96H20 258 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 AP4S1Q9Y587 144 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 DNALI1O14645 258 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 NUP62P37198 522 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 STX3Q13277 289 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 CC2D2BQ6DHV5 1058 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 PRUNE1Q86TP1 453 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 DCDC2Q9UHG0 476 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 PSMA2P25787 234 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 GTF2H3Q13889 308 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 TFDP2Q14188 446 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 RNF26Q9BY78 433 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 VIPAS39Q9H9C1 493 aa13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 KLHL8Q9P2G9 620 aaPredicted RBP13.94□□□□□ -0.18
SRGAP3-201ENST00000360413 PHF20L1A8MW92 1017 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 SEMA3FQ13275 785 aa13.93□□□□□ -0.18
SRGAP3-201ENST00000360413 GPR141Q7Z602 305 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms