RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
GTF3C2-202ENST00000359541 TMEM110-MUSTN1A8MSY1 372 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 AGPSO00116 658 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 NR3C2P08235 984 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 HSPA9P38646 679 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 MRPS9P82933 396 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 SNRNP48Q6IEG0 339 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 CD302Q8IX05 232 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 SCYL3Q8IZE3 742 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 TMC2Q8TDI7 906 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 C1orf112Q9NSG2 853 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 GJA3Q9Y6H8 435 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 ASTN2O75129 1339 aaPredicted RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 C19orf81C9J6K1 198 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 BAATQ14032 418 aaPredicted RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 MICALCLQ6ZW33 695 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 MAP4K3Q8IVH8 894 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 ZNF280CQ8ND82 737 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 FBXL13Q8NEE6 735 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 TRIM11Q96F44 468 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 THAP2Q9H0W7 228 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 IKZF4Q9H2S9 585 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 ATP6V0A4Q9HBG4 840 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 GABBR1Q9UBS5 961 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 SEPT9Q9UHD8 586 aaPredicted RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 RGPD3A6NKT7 1758 aaPredicted RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 RGPD4Q7Z3J3 1758 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 GOLGA8IPA6NC78 632 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 GOLGA8JA6NMD2 632 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 PHF20L1A8MW92 1017 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 VWA5AO00534 786 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 KIAA0391O15091 583 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 HADHBP55084 474 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 BACE1P56817 501 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 BPIFB4P59827 614 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 DR1Q01658 176 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 EPC2Q52LR7 807 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 APOBEC3FQ8IUX4 373 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 TSEN2Q8NCE0 465 aaKnown RBP10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 RPS6KC1Q96S38 1066 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 MAF1Q9H063 256 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 WNT8AQ9H1J5 351 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 OSGEPQ9NPF4 335 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 AMACRQ9UHK6 382 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 PLAAQ9Y263 795 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 STXBP5LQ9Y2K9 1186 aa10.03□□□□□ -0.8
GTF3C2-202ENST00000359541 KRT5P13647 590 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 CNGA1P29973 690 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 LIG4P49917 911 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 ZNF280AP59817 542 aaPredicted RBP10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 BIRC3Q13489 604 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 TTLL12Q14166 644 aaPredicted RBP10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 MAIP1Q8WWC4 291 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 ATG4CQ96DT6 458 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 ATP6V1G3Q96LB4 118 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 ACAD9Q9H845 621 aa10.02□□□□□ -0.8
GTF3C2-202ENST00000359541 IGSF9BQ9UPX0 1349 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 KIF13BQ9NQT8 1826 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 NR1D1P20393 614 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 NPTX2P47972 431 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 EIF3BP55884 814 aaKnown RBP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 PPP3CAQ08209 521 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 PLA2G4FQ68DD2 849 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 B4GALNT4Q76KP1 1039 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 HOOK3Q86VS8 718 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 MICALL2Q8IY33 904 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 GPD1LQ8N335 351 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 C1orf131Q8NDD1 294 aaKnown RBP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 BCAS4Q8TDM0 211 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 ZNF653Q96CK0 615 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 FMO2Q99518 471 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 TMEM117Q9H0C3 514 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 JPH1Q9HDC5 661 aaPredicted RBP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 UVRAGQ9P2Y5 699 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 EP400Q96L91 3159 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 ZNF233A6NK53 670 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 KIAA0754O94854 1291 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 CHRNA3P32297 505 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 ERVK-9P63128 1117 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 ENPEPQ07075 957 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 MESDQ14696 234 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 PPP1R2P3Q6NXS1 205 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 SPATS2Q86XZ4 545 aaKnown RBP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 WRNIP1Q96S55 665 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 SENP7Q9BQF6 1050 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 TEX13BQ9BXU2 312 aa10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 RRP15Q9Y3B9 282 aaKnown RBP10.02□□□□□ -0.81
GTF3C2-202ENST00000359541 ZSCAN5CA6NGD5 496 aaPredicted RBP10.01□□□□□ -0.81
GTF3C2-202ENST00000359541 PODXLO00592 558 aa10.01□□□□□ -0.81
GTF3C2-202ENST00000359541 ZC3H11AO75152 810 aaKnown RBP eCLIP10.01□□□□□ -0.81
GTF3C2-202ENST00000359541 DLATP10515 647 aaKnown RBP10.01□□□□□ -0.81
GTF3C2-202ENST00000359541 GARTP22102 1010 aa10.01□□□□□ -0.81
GTF3C2-202ENST00000359541 CETN2P41208 172 aa10.01□□□□□ -0.81
GTF3C2-202ENST00000359541 POLGP54098 1239 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms