RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PACS1Q6VY07 963 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 RBBP8NLQ8NC74 664 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 UHMK1Q8TAS1 419 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 NELFBQ8WX92 580 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 DNAJC1Q96KC8 554 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 SNX27Q96L92 541 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 MPHOSPH6Q99547 160 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 TUT1Q9H6E5 874 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 USP40Q9NVE5 1235 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 DDX25Q9UHL0 483 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 LRCH1Q9Y2L9 728 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 CEP350Q5VT06 3117 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 A6NJR5 290 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 KRT86O43790 486 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 SMARCA1P28370 1054 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 ECHS1P30084 290 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 PDE6CP51160 858 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 GEMIN4P57678 1058 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 PTPAQ15257 358 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 AGBL2Q5U5Z8 902 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF662Q6ZS27 426 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 RNF10Q8N5U6 811 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 ESR2Q92731 530 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZIC5Q96T25 663 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 SIKE1Q9BRV8 207 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 CTNNAL1Q9UBT7 734 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 KCNH3Q9ULD8 1083 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 SLC45A1Q9Y2W3 748 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 TDRKHQ9Y2W6 561 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF711Q9Y462 761 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 STK24Q9Y6E0 443 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 NCK2O43639 380 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 CHN1P15882 459 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 RTP1P59025 263 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 MLLT1Q03111 559 aaPredicted RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 NSUN2Q08J23 767 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 CAMK2BQ13554 666 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 MUM1Q2TAK8 710 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 IFIT1BQ5T764 474 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 SPATA1Q5VX52 437 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 ENDOVQ8N8Q3 282 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 TTC8Q8TAM2 541 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 PIGOQ8TEQ8 1089 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 RSPH1Q8WYR4 309 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 CENPTQ96BT3 561 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 PPP1R14BQ96C90 147 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 TDRD3Q9H7E2 651 aaKnown RBP10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 VAT1LQ9HCJ6 419 aa10.01□□□□□ -0.81
SMARCAL1-202ENST00000358207 PARP14Q460N5 1801 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 TTC26A0AVF1 554 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 GSTT2P0CG29 244 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 GSTT2BP0CG30 244 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 MTTPP55157 894 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 CYP27A1Q02318 531 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 SH3D19Q5HYK7 790 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZNF654Q8IZM8 581 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 FITM2Q8N6M3 262 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 NUDCD1Q96RS6 583 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 VPS16Q9H269 839 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 ADAM7Q9H2U9 754 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 SAMD15Q9P1V8 674 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 NVLO15381 856 aaKnown RBP10□□□□□ -0.81
SMARCAL1-202ENST00000358207 SNX3O60493 162 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 OAS1P00973 400 aaKnown RBP10□□□□□ -0.81
SMARCAL1-202ENST00000358207 ZCCHC18P0CG32 403 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 CTNNA1P35221 906 aaKnown RBP10□□□□□ -0.81
SMARCAL1-202ENST00000358207 GALK1P51570 392 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 USH1GQ495M9 461 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 IFNL1Q8IU54 200 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 LRRC43Q8N309 656 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 ANKLE1Q8NAG6 615 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 STKLD1Q8NE28 680 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 ALG1Q9BT22 464 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 OSBPL10Q9BXB5 764 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 KRT23Q9C075 422 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 FAM217BQ9NTX9 383 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-202ENST00000358207 PDP2Q9P2J9 529 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 RABL2AQ9UBK7 228 aaPredicted RBP10□□□□□ -0.81
SMARCAL1-202ENST00000358207 PNMA2Q9UL42 364 aa10□□□□□ -0.81
SMARCAL1-202ENST00000358207 GAKO14976 1311 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 NPHP3-ACAD11A0A0J9YXS1 232 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 SART1O43290 800 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 UBTFL6P0CB48 400 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 COL6A2P12110 1019 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 ERCC5P28715 1186 aaPredicted RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 FLT3P36888 993 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 ADARP55265 1226 aaKnown RBP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 KRT31Q15323 416 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 DLGAP5Q15398 846 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 LIN52Q52LA3 116 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 SH2D4BQ5SQS7 431 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 PHLDB3Q6NSJ2 640 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 CDAN1Q8IWY9 1227 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 NRG4Q8WWG1 115 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 MLXIPQ9HAP2 919 aa9.99□□□□□ -0.81
SMARCAL1-202ENST00000358207 CTTNBP2NLQ9P2B4 639 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms