RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 ZNF341Q9BYN7 854 aa7.32□□□□□ -1.24
RTN4-203ENST00000357376 RAVER2Q9HCJ3 691 aaKnown RBP7.32□□□□□ -1.24
RTN4-203ENST00000357376 SAYSD1Q9NPB0 183 aa7.32□□□□□ -1.24
RTN4-203ENST00000357376 ASTN1O14525 1302 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 TMEM120BA0PK00 339 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 RTN2O75298 545 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 KRT1P04264 644 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 P4HBP07237 508 aaKnown RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 ARP10275 920 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 GYS1P13807 737 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 ANXA13P27216 316 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 TNFRSF8P28908 595 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 SREBF1P36956 1147 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 PPP2R5AQ15172 486 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 MTERF2Q49AM1 385 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 COBLL1Q53SF7 1204 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 BRDTQ58F21 947 aaPredicted RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 CTAGE3PQ8IX95 158 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 LNX1Q8TBB1 728 aaPredicted RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 SMC6Q96SB8 1091 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 WNT8AQ9H1J5 351 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 SERPINA10Q9UK55 444 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 DISP2A7MBM2 1401 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 GRIN2DO15399 1336 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 LRRD1A4D1F6 860 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 PI4K2BG5E9Z4 385 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 H0Y3Z8 333 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 EIF3DO15371 548 aaKnown RBP eCLIP7.31□□□□□ -1.24
RTN4-203ENST00000357376 ZBED4O75132 1171 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 APBA3O96018 575 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 AGTP01019 485 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 QARSP47897 775 aaKnown RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 MARCKSL1P49006 195 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 NPEPPSP55786 919 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 ASTE1Q2TB18 679 aaPredicted RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 KRT39Q6A163 491 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 KIRREL3Q8IZU9 778 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 ANKRD35Q8N283 1001 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 CERS5Q8N5B7 392 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 KAT5Q92993 513 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 MCUR1Q96AQ8 359 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 SGSM3Q96HU1 749 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 POP1Q99575 1024 aaKnown RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 LBHD1Q9BQE6 289 aaPredicted RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 ZSWIM1Q9BR11 485 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 POLR3CQ9BUI4 534 aaPredicted RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 UNC45AQ9H3U1 944 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 ECT2Q9H8V3 914 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 KCNMB3Q9NPA1 279 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.31□□□□□ -1.24
RTN4-203ENST00000357376 INTUQ9ULD6 942 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 TRPC6Q9Y210 931 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 PFASO15067 1338 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 TMEM150BA6NC51 233 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 CCT8L1PA6NM43 557 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 RBAK-RBAKDNI3L0D1 243 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 MEIS2O14770 477 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 ATP2A2P16615 1042 aaKnown RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 SCP2P22307 547 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 CALRP27797 417 aaKnown RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 POLGP54098 1239 aaPredicted RBP7.31□□□□□ -1.24
RTN4-203ENST00000357376 PTENP60484 403 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 QPCTQ16769 361 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 TMEM270Q6UE05 265 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 HHIPL2Q6UWX4 724 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 ZNF720Q7Z2F6 126 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 PALM2Q8IXS6 379 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 CRAMP1Q96RY5 1269 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 CXorf56Q9H5V9 222 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 ADAM22Q9P0K1 906 aa7.31□□□□□ -1.24
RTN4-203ENST00000357376 MYO3BQ8WXR4 1341 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 TRAPPC3O43617 180 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 ADRA2BP18089 450 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 GCKP35557 465 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 DRP2Q13474 957 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 TRPM8Q7Z2W7 1104 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 MCF2L2Q86YR7 1114 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 RSAD2Q8WXG1 361 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 VTI1AQ96AJ9 217 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 MKNK1Q9BUB5 465 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 MAK16Q9BXY0 300 aaKnown RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 TMEM117Q9H0C3 514 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 ETNK1Q9HBU6 452 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 SUGT1Q9Y2Z0 365 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 NR2E1Q9Y466 385 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 SPATA31C1P0DKV0 1188 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 DESP17661 470 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 YWHABP31946 246 aaKnown RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 MAN1A1P33908 653 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 COILP38432 576 aaPredicted RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 RPL21P46778 160 aaKnown RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 DLG4P78352 724 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 SNRNP35Q16560 246 aaKnown RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 ANKRD20A3Q5VUR7 823 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 SCARA5Q6ZMJ2 495 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 EPM2AIP1Q7L775 607 aaPredicted RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 SLC47A2Q86VL8 602 aa7.3□□□□□ -1.24
RTN4-203ENST00000357376 SLC13A5Q86YT5 568 aaPredicted RBP7.3□□□□□ -1.24
RTN4-203ENST00000357376 CBWD2Q8IUF1 395 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms