RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 KDM4FA0A1W2PPD8 638 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 GSTA4O15217 222 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 SLC16A4O15374 487 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 TADA3O75528 432 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 ZNF18P17022 549 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 EPHB1P54762 984 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 OSTNP61366 133 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 ADCY1Q08828 1119 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 TTLL4Q14679 1199 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 STAT4Q14765 748 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 CEP55Q53EZ4 464 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 ACAD11Q709F0 780 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 TXNRD3Q86VQ6 643 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 CRAMP1Q96RY5 1269 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 SNX12Q9UMY4 172 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 SPAG7O75391 227 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 CDC42EP1Q00587 391 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 SNRNP48Q6IEG0 339 aaKnown RBP12.5□□□□□ -0.41
COL9A1-202ENST00000357250 TRIM67Q6ZTA4 783 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 RASGRP2Q7LDG7 609 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 BANK1Q8NDB2 785 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 SPATA4Q8NEY3 305 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 IGDCC4Q8TDY8 1250 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 MAML1Q92585 1016 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 CCDC138Q96M89 665 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 ZBTB18Q99592 522 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 C11orf70Q9BRQ4 267 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 FAM213AQ9BRX8 229 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 KLHL8Q9P2G9 620 aaPredicted RBP12.5□□□□□ -0.41
COL9A1-202ENST00000357250 WDR35Q9P2L0 1181 aa12.5□□□□□ -0.41
COL9A1-202ENST00000357250 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 RTN2O75298 545 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 GNA15P30679 374 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 PHEXP78562 749 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 SLC18A3Q16572 532 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 POTEGQ6S5H5 508 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 POTEEQ6S8J3 1075 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 EEPD1Q7L9B9 569 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 ST13P4Q8IZP2 240 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-202ENST00000357250 HSPH1Q92598 858 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 PARVAQ9NVD7 372 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 MYO5BQ9ULV0 1848 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 AKR1B1P15121 316 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 NCF2P19878 526 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-202ENST00000357250 E2F5Q15329 346 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 TRIM59Q8IWR1 403 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 TBC1D16Q8TBP0 767 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 ACAP3Q96P50 834 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 MYO1CO00159 1063 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 SMAPO00193 183 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 GYG2O15488 501 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 MAGOHP61326 146 aaKnown RBP12.49□□□□□ -0.41
COL9A1-202ENST00000357250 LRIG3Q6UXM1 1119 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 LRRC31Q6UY01 552 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 HAUS6Q7Z4H7 955 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 STK33Q9BYT3 514 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 BFARQ9NZS9 450 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 BAZ2BQ9UIF8 2168 aaKnown RBP12.49□□□□□ -0.41
COL9A1-202ENST00000357250 A0A1W2PQJ5 194 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 SRGAP2O75044 1071 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 DPYDQ12882 1025 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 BYSLQ13895 437 aaKnown RBP12.49□□□□□ -0.41
COL9A1-202ENST00000357250 DUOXA2Q1HG44 320 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 TKFCQ3LXA3 575 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 NFRKBQ6P4R8 1299 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
COL9A1-202ENST00000357250 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
COL9A1-202ENST00000357250 TDP2O95551 362 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 PPP6R3Q5H9R7 873 aaPredicted RBP12.48□□□□□ -0.41
COL9A1-202ENST00000357250 MYLK4Q86YV6 388 aaPredicted RBP12.48□□□□□ -0.41
COL9A1-202ENST00000357250 LPAR1Q92633 364 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 AGPAT1Q99943 283 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 MKNK1Q9BUB5 465 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 HAUS5O94927 633 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 BRAFP15056 766 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 TSPY1Q01534 308 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 OCRLQ01968 901 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 ZNF543Q08ER8 600 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 CCDC137Q6PK04 289 aaKnown RBP12.48□□□□□ -0.41
COL9A1-202ENST00000357250 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 GCNAQ96QF7 691 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 CENPKQ9BS16 269 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 PPARGC1AQ9UBK2 798 aaKnown RBP12.48□□□□□ -0.41
COL9A1-202ENST00000357250 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
COL9A1-202ENST00000357250 ELF1P32519 619 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 TTC17Q96AE7 1141 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 ZNF560Q96MR9 790 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
COL9A1-202ENST00000357250 MTMR4Q9NYA4 1195 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 GABBR1Q9UBS5 961 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 ENTPD3O75355 529 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 BCAR1P56945 870 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 COPS2P61201 443 aa12.48□□□□□ -0.41
COL9A1-202ENST00000357250 PSMC1P62191 440 aaKnown RBP12.48□□□□□ -0.41
COL9A1-202ENST00000357250 LLGL1Q15334 1064 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms