RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CBWD5Q5RIA9 395 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 LMNTD2Q8IXW0 634 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 BTBD6Q96KE9 485 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 SIX2Q9NPC8 291 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 DDX4Q9NQI0 724 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.85□□□□□ -0.994e-6■□□□□ 9
CDC42SE1-201ENST00000357235 MTRF1LQ9UGC7 380 aaKnown RBP8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 TBK1Q9UHD2 729 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRAF3IP3Q9Y228 551 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 DAGLAQ9Y4D2 1042 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ALG6Q9Y672 507 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 ASTN1O14525 1302 aa8.85□□□□□ -0.99
CDC42SE1-201ENST00000357235 BTNL10A8MVZ5 291 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 PDXKO00764 312 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 RASGRF2O14827 1237 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 ATP2A2P16615 1042 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 LMNB1P20700 586 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 RXRBP28702 533 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 PTENP60484 403 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 MRPS35P82673 323 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLFN12Q8IYM2 578 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 RASGEF1CQ8N431 466 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLC20A1Q8WUM9 679 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 NAP1L3Q99457 506 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 MOV10L1Q9BXT6 1211 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 IQCGQ9H095 443 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 PCIF1Q9H4Z3 704 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 ACP6Q9NPH0 428 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 USP40Q9NVE5 1235 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 FRMD4BQ9Y2L6 1034 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 MYH4Q9Y623 1939 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM86B1E9PN63 330 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 G3V3G9 751 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 SPOPO43791 374 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 EXOC3O60645 756 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 FAM86B2P0C5J1 330 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 PRKCIP41743 596 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 RPL21P46778 160 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 CLK2P49760 499 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 MAPK7Q13164 816 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 GPATCH4Q5T3I0 446 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 CCDC137Q6PK04 289 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 HS2ST1Q7LGA3 356 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 SLF2Q8IX21 1173 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 SPICE1Q8N0Z3 855 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 EIF1ADQ8N9N8 165 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 POP1Q99575 1024 aaKnown RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 FGFR1OP2Q9NVK5 253 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 PKD2L1Q9P0L9 805 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 TRPC5Q9UL62 973 aaPredicted RBP8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 COG5Q9UP83 839 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 STXBP5LQ9Y2K9 1186 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 SPATA31A1Q5TZJ5 1347 aa8.84□□□□□ -0.99
CDC42SE1-201ENST00000357235 DLEC1Q9Y238 1755 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 RBM47A0AV96 593 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SPDYE5A6NIY4 337 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 FOXN3O00409 490 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ABLIM1O14639 778 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 FTLP02792 175 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SPATA31C1P0DKV0 1188 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 PCK1P35558 622 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 FMO5P49326 533 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 DUPD1Q68J44 220 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 NSMFQ6X4W1 530 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 TRPM8Q7Z2W7 1104 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SLFN11Q7Z7L1 901 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 CPNE8Q86YQ8 564 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SYT2Q8N9I0 419 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 MAIP1Q8WWC4 291 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ELMO3Q96BJ8 720 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ANKRD27Q96NW4 1050 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 UBE2TQ9NPD8 197 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 CCNL1Q9UK58 526 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 PITPNM2Q9BZ72 1349 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 KIAA1551Q9HCM1 1747 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 TCRBV7S2A1N4TA0A589 114 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 TCP11X1B4DZS4 312 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 DDX3YO15523 660 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 TGFB1I1O43294 461 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 UBOX5O94941 541 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ALADP13716 330 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 CREB1P16220 341 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 RPA1P27694 616 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 NT5C2P49902 561 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 KCNJ2P63252 427 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 MYBPC3Q14896 1274 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 DPY19L2P1Q6NXN4 242 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 BARGINQ6ZT62 677 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 PHLDB2Q86SQ0 1253 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 ERICH1Q86X53 443 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 FAM178BQ8IXR5 827 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 UBL4BQ8N7F7 174 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 PRCCQ92733 491 aaPredicted RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 P2RX7Q99572 595 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 SH2D3AQ9BRG2 576 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 YIPF2Q9BWQ6 316 aa8.83□□□□□ -1
CDC42SE1-201ENST00000357235 UBE2OQ9C0C9 1292 aaKnown RBP8.83□□□□□ -1
CDC42SE1-201ENST00000357235 KCNMB3Q9NPA1 279 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms