RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZMYND12Q9H0C1 365 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 TMEM60Q9H2L4 133 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 NFU1Q9UMS0 254 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 PCDHGB4Q9UN71 923 aa5.88□□□□□ -1.47
PTPRD-202ENST00000356435 RPS6KA4O75676 772 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ASMTLO95671 621 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PLA2G4AP47712 749 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 FOXD4Q12950 439 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PKN3Q6P5Z2 889 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 APPL2Q8NEU8 664 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 BHMT2Q9H2M3 363 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SPON1Q9HCB6 807 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 NR3C1P04150 777 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ZFXP17010 805 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PSMC5P62195 406 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 GPSM2P81274 684 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 RCSD1Q6JBY9 416 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ANKRD13CQ8N6S4 541 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SCFD1Q8WVM8 642 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 DACH2Q96NX9 599 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 MXD3Q9BW11 206 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 APOBEC2Q9Y235 224 aaKnown RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ZBTB7AO95365 584 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 VCPP55072 806 aaKnown RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PRAMEP78395 509 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ZBED6P86452 979 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 TMPRSS15P98073 1019 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 NME3Q13232 169 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 RRM2BQ7LG56 351 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 IL17REQ8NFR9 667 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SPATA16Q9BXB7 569 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 TRIM55Q9BYV6 548 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 IP6K2Q9UHH9 426 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PCDHA6Q9UN73 950 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PCDHA8Q9Y5H6 950 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SYCE1LA8MT33 242 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 AP5Z1O43299 807 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SPAG7O75391 227 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 FTCDO95954 541 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 KRT8P05787 483 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 BRAFP15056 766 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SNAP25P60880 206 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PPP1R2P1Q96PQ5 205 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SLC38A7Q9NVC3 462 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PCDHA13Q9Y5I0 950 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 AP3B1O00203 1094 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 KIAA0391O15091 583 aaKnown RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 DCTN3O75935 186 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 RALBP11234 206 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ANKRD40Q6AI12 368 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 DGKHQ86XP1 1220 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PIP4K2CQ8TBX8 421 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 HINFPQ9BQA5 517 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ECT2Q9H8V3 914 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SAYSD1Q9NPB0 183 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 CEP72Q9P209 647 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 DBNLQ9UJU6 430 aaKnown RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 A2ML1A8K2U0 1454 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 A8MXQ7 604 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PRKAB2O43741 272 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 HIST1H2AGP0C0S8 130 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 HIST1H2ADP20671 130 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ARHGEF7Q14155 803 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 RASIP1Q5U651 963 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 DCP1BQ8IZD4 617 aaKnown RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 WDR48Q8TAF3 677 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SH3RF3Q8TEJ3 882 aaPredicted RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 RAD54LQ92698 747 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 HIST1H2AHQ96KK5 128 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 HIST1H2AJQ99878 128 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 H2AFJQ9BTM1 129 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 EPB41L5Q9HCM4 733 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 TBK1Q9UHD2 729 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 MRFAP1Q9Y605 127 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 KRT7P08729 469 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 GCKP35557 465 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 HPCAP84074 193 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 TAP1Q03518 808 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 ANO4Q32M45 955 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 TBC1D9BQ66K14 1250 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SPON2Q9BUD6 331 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 SLC9A2Q9UBY0 812 aa5.87□□□□□ -1.47
PTPRD-202ENST00000356435 PIN4Q9Y237 131 aaKnown RBP5.87□□□□□ -1.47
PTPRD-202ENST00000356435 APOL1O14791 398 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SUPT3HO75486 399 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 AKT1P31749 480 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SULT1E1P49888 294 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 HSD17B4P51659 736 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 CORO7P57737 925 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 KIF23Q02241 960 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 C2orf54Q08AI8 447 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 MAPRE2Q15555 327 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ELP3Q9H9T3 547 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SH3BP1Q9Y3L3 701 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 UTYO14607 1347 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SRRM3A6NNA2 597 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PRRG1O14668 218 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms