RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KLF15Q9UIH9 416 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 MLH1P40692 756 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 TBC1D9BQ66K14 1250 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 ERLEC1Q96DZ1 483 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 TMA16Q96EY4 203 aaKnown RBP18.25■□□□□ 0.51
COL27A1-201ENST00000356083 PCDHA7Q9UN72 937 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL27A1-201ENST00000356083 TTLL4Q14679 1199 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 FAM102AQ5T9C2 384 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-201ENST00000356083 COMMD2Q86X83 199 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 TTLL6Q8N841 843 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 TSC22D3Q99576 134 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 ATP5JP18859 108 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 C6orf118Q5T5N4 469 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 EML4Q9HC35 981 aaKnown RBP18.25■□□□□ 0.51
COL27A1-201ENST00000356083 CYP26B1Q9NR63 512 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 ASAP1Q9ULH1 1129 aa18.25■□□□□ 0.51
COL27A1-201ENST00000356083 A8MXQ7 604 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 SEMA3FQ13275 785 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 OR6J1Q8NGC5 347 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 ALG13Q9NP73 1137 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 CCDC92Q53HC0 331 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 SNRNP48Q6IEG0 339 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 UTP6Q9NYH9 597 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 LEMD3Q9Y2U8 911 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 ATP1A1P05023 1023 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 FCER1AP12319 257 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 NNTQ13423 1086 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 NDEL1Q9GZM8 345 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 BHMT2Q9H2M3 363 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 ZFP69BQ9UJL9 534 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 THOC2Q8NI27 1593 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 GOLGA8RI6L899 631 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 FGGP02679 453 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 GCLMP48507 274 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 RPS6P62753 249 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 E2F4Q16254 413 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 TFRCP02786 760 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 HIST1H2AGP0C0S8 130 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 HIST1H2ADP20671 130 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 ARL4CP56559 192 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 LRRC36Q1X8D7 754 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 BEND6Q5SZJ8 279 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 HIST1H2AHQ96KK5 128 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 HIST1H2AJQ99878 128 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 H2AFJQ9BTM1 129 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 SPATA16Q9BXB7 569 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 NFU1Q9UMS0 254 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 MYH9P35579 1960 aaKnown RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 BTKQ06187 659 aa18.24■□□□□ 0.51
COL27A1-201ENST00000356083 TRIP4Q15650 581 aaPredicted RBP18.24■□□□□ 0.51
COL27A1-201ENST00000356083 DAB1O75553 588 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 CDC16Q13042 620 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 SWSAP1Q6NVH7 229 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 GIMAP8Q8ND71 665 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-201ENST00000356083 ZNF555Q8NEP9 628 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 EPHB4P54760 987 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 CROCCQ5TZA2 2017 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 NT5DC4Q86YG4 428 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 NDUFS3O75489 264 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 WEE1P30291 646 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 RWDD2BP57060 319 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 EFHC2Q5JST6 749 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 OOSP2Q86WS3 158 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 IL1RL2Q9HB29 575 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 LINC00854A0A1B0GVQ3 168 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 LDHAP00338 332 aaKnown RBP18.23■□□□□ 0.51
COL27A1-201ENST00000356083 GNA15P30679 374 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 LRRC8BQ6P9F7 803 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 CNOT8Q9UFF9 292 aaKnown RBP18.23■□□□□ 0.51
COL27A1-201ENST00000356083 PIN4Q9Y237 131 aaKnown RBP18.23■□□□□ 0.51
COL27A1-201ENST00000356083 PRG3Q9Y2Y8 225 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-201ENST00000356083 MZF1P28698 734 aaPredicted RBP18.23■□□□□ 0.51
COL27A1-201ENST00000356083 AP2B1P63010 937 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 MGAT5BQ3V5L5 792 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 KLHL24Q6TFL4 600 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 PID1Q7Z2X4 250 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 SLC44A4Q53GD3 710 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 ANKS6Q68DC2 871 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 KRT84Q9NSB2 600 aa18.23■□□□□ 0.51
COL27A1-201ENST00000356083 ADCY9O60503 1353 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 IFNEQ86WN2 208 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 MYCBPQ99417 103 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 TRIM62Q9BVG3 475 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 REXO4Q9GZR2 422 aaKnown RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 KLHL18O94889 574 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 TYK2P29597 1187 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 GABPB1Q06547 395 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 ZNF658Q5TYW1 1059 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 USP33Q8TEY7 942 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 DPF3Q92784 378 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 APOL5Q9BWW9 433 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 HOXC10Q9NYD6 342 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 LSM7Q9UK45 103 aaKnown RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 FAM196BA6NMK8 535 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 HPGDP15428 266 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 IL10P22301 178 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms