RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 FAM81BQ96LP2 452 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 C16orf70Q9BSU1 422 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 TMEM117Q9H0C3 514 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 INTUQ9ULD6 942 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 Q9Y3F1 56 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 LRRIQ3A6PVS8 624 aaPredicted RBP18.71■□□□□ 0.59
VPS13B-201ENST00000355155 F8VZ95 297 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 C22orf31O95567 290 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 PROZP22891 400 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 SOX5P35711 763 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 TM4SF4P48230 202 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 KIF22Q14807 665 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 CBWD2Q8IUF1 395 aa18.71■□□□□ 0.59
VPS13B-201ENST00000355155 RNF10Q8N5U6 811 aaKnown RBP18.71■□□□□ 0.59
VPS13B-201ENST00000355155 RCCD1A6NED2 376 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 MSCO60682 206 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 SLU7O95391 586 aaKnown RBP18.7■□□□□ 0.58
VPS13B-201ENST00000355155 APBA1Q02410 837 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 ACVR2BQ13705 512 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 ZSWIM2Q8NEG5 633 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 GLG1Q92896 1179 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 LZTFL1Q9NQ48 299 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 ANO9A1A5B4 782 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 K7ERI5 159 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 ABLIM1O14639 778 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 FAM189A1O60320 539 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 ZNF157P51786 506 aaPredicted RBP18.7■□□□□ 0.58
VPS13B-201ENST00000355155 TMEM63BQ5T3F8 832 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 KRT39Q6A163 491 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 CRELD2Q6UXH1 353 aaPredicted RBP18.7■□□□□ 0.58
VPS13B-201ENST00000355155 SLC30A5Q8TAD4 765 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 FZD8Q9H461 694 aa18.7■□□□□ 0.58
VPS13B-201ENST00000355155 AMPD2Q01433 879 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 LAMTOR4Q0VGL1 99 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 MKRN3Q13064 507 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 DPP9Q86TI2 863 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 PRPF31Q8WWY3 499 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 POMGNT1Q8WZA1 660 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 ZNF592Q92610 1267 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 CCDC102AQ96A19 550 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 HAPLN2Q9GZV7 340 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 ZNF233A6NK53 670 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 HNRNPDLO14979 420 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 ABL1P00519 1130 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 CCDC172P0C7W6 258 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 LIG4P49917 911 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 KLHL30Q0D2K2 578 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 RAPGEF1Q13905 1077 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 LACRTQ9GZZ8 138 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 LUC7LQ9NQ29 371 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 DNAJC12Q9UKB3 198 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 GNEQ9Y223 722 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 UTRNP46939 3433 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 SMPD1P17405 629 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 MXI1P50539 228 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 TFDP1Q14186 410 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 BMS1Q14692 1282 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 PAPD7Q5XG87 772 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 PHLDB3Q6NSJ2 640 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 SPAG5Q96R06 1193 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 IFIH1Q9BYX4 1025 aaKnown RBP18.69■□□□□ 0.58
VPS13B-201ENST00000355155 PTPRHQ9HD43 1115 aa18.69■□□□□ 0.58
VPS13B-201ENST00000355155 MCL1Q07820 350 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 SREBF2Q12772 1141 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 KIF5AQ12840 1032 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 KIAA1328Q86T90 577 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 SLC35F6Q8N357 371 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 SOCS4Q8WXH5 440 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 AKR1B10O60218 316 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 EDN1P05305 212 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 MMP3P08254 477 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 ADCYAP1R1P41586 468 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 CCDC122Q5T0U0 273 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 ZNF571Q7Z3V5 609 aaPredicted RBP18.68■□□□□ 0.58
VPS13B-201ENST00000355155 TRIM50Q86XT4 487 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 NAPGQ99747 312 aaPredicted RBP18.68■□□□□ 0.58
VPS13B-201ENST00000355155 ACO2Q99798 780 aaKnown RBP18.68■□□□□ 0.58
VPS13B-201ENST00000355155 MRPL4Q9BYD3 311 aaKnown RBP18.68■□□□□ 0.58
VPS13B-201ENST00000355155 IRX2Q9BZI1 471 aaPredicted RBP18.68■□□□□ 0.58
VPS13B-201ENST00000355155 GJD2Q9UKL4 321 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 ANK1P16157 1881 aa18.68■□□□□ 0.58
VPS13B-201ENST00000355155 PTENP60484 403 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 DRP2Q13474 957 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 ZNF569Q5MCW4 686 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 TSHZ1Q6ZSZ6 1077 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 ANKRD7Q92527 254 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 DEF6Q9H4E7 631 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 AGO2Q9UKV8 859 aaKnown RBP18.67■□□□□ 0.58
VPS13B-201ENST00000355155 CTAGE9A4FU28 777 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 LRRIQ4A6NIV6 560 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 A6NJR5 290 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 ZNF865P0CJ78 1059 aaPredicted RBP18.67■□□□□ 0.58
VPS13B-201ENST00000355155 MAGEA1P43355 309 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 AP3M2P53677 418 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 NKX3-2P78367 333 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 PTK2Q05397 1052 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 DRAP1Q14919 205 aaPredicted RBP18.67■□□□□ 0.58
VPS13B-201ENST00000355155 TCEAL1Q15170 157 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 NAB2Q15742 525 aa18.67■□□□□ 0.58
VPS13B-201ENST00000355155 ENOSF1Q7L5Y1 443 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms