RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 FAM102AQ5T9C2 384 aaPredicted RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 SYT2Q8N9I0 419 aaPredicted RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 SMYD2Q9NRG4 433 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 GIPC1O14908 333 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 CREB3O43889 395 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 WEE2P0C1S8 567 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 LCP1P13796 627 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 ATN1P54259 1190 aaPredicted RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 PDXDC1Q6P996 788 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 SMC1BQ8NDV3 1235 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 SKA2Q8WVK7 121 aaPredicted RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 GINM1Q9NU53 330 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 PHLPP2Q6ZVD8 1323 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 ARHGEF18Q6ZSZ5 1173 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 CPA5Q8WXQ8 436 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 RABGGTAQ92696 567 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 ZBTB39O15060 712 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 MAGEB2O15479 319 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 TBK1Q9UHD2 729 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 STX2P32856 288 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 SMAD1Q15797 465 aaKnown RBP14.65□□□□□ -0.06
SMC6-201ENST00000351948 IER5Q5VY09 327 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 GTF3C2Q8WUA4 911 aaPredicted RBP14.65□□□□□ -0.06
SMC6-201ENST00000351948 PRPF31Q8WWY3 499 aaKnown RBP14.65□□□□□ -0.06
SMC6-201ENST00000351948 POLR3CQ9BUI4 534 aaPredicted RBP14.65□□□□□ -0.06
SMC6-201ENST00000351948 TMEM106CQ9BVX2 250 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 SIK2Q9H0K1 926 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 FAM49BQ9NUQ9 324 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 KLHL11Q9NVR0 708 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 LIMA1Q9UHB6 759 aaKnown RBP14.65□□□□□ -0.06
SMC6-201ENST00000351948 ANAPC5Q9UJX4 755 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 SLIT3O75094 1523 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 PPP1R3GB7ZBB8 358 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 ZRANB2O95218 330 aaKnown RBP eCLIP14.65□□□□□ -0.061e-8■■■■■ 54.5
SMC6-201ENST00000351948 ATXN8OSP0DMR3 200 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 UCHL3P15374 230 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 RGS2P41220 211 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 TMEM132DQ14C87 1099 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 BBS9Q3SYG4 887 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 KATNAL1Q9BW62 490 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 PPP2R3BQ9Y5P8 575 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 ZBTB24O43167 697 aaPredicted RBP14.65□□□□□ -0.06
SMC6-201ENST00000351948 PHBP35232 272 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 PGM5Q15124 567 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 GLT1D1Q96MS3 346 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 MKRN1Q9UHC7 482 aaKnown RBP14.65□□□□□ -0.06
SMC6-201ENST00000351948 AFG3L2Q9Y4W6 797 aa14.65□□□□□ -0.06
SMC6-201ENST00000351948 A0A1B0GTH6 734 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 ZBED1O96006 694 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 TSTA3Q13630 321 aaPredicted RBP14.64□□□□□ -0.07
SMC6-201ENST00000351948 DCLK2Q8N568 766 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 MROH8Q9H579 483 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 NPTXRO95502 500 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 THPOP40225 353 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 DHX9Q08211 1270 aaKnown RBP14.64□□□□□ -0.07
SMC6-201ENST00000351948 MAP7D1Q3KQU3 841 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 XRRA1Q6P2D8 792 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 IFT122Q9HBG6 1241 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 TTC7AQ9ULT0 858 aaPredicted RBP14.64□□□□□ -0.07
SMC6-201ENST00000351948 SDC4P31431 198 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 RFC5P40937 340 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 IFNAR2P48551 515 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 AMHR2Q16671 573 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 IGSF9BQ9UPX0 1349 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 SH3BP5O60239 455 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 GCLCP48506 637 aaPredicted RBP14.64□□□□□ -0.07
SMC6-201ENST00000351948 DR1Q01658 176 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 MICALL1Q8N3F8 863 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 TRAPPC12Q8WVT3 735 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 P3H4Q92791 437 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 CLMNQ96JQ2 1002 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 PBKQ96KB5 322 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 EPC1Q9H2F5 836 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 APEX2Q9UBZ4 518 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 TRIM10Q9UDY6 481 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 CAPN11Q9UMQ6 739 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 TFR2Q9UP52 801 aa14.64□□□□□ -0.07
SMC6-201ENST00000351948 YDJCA8MPS7 323 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 GRAP2O75791 330 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 SEPT6Q14141 434 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 FYB2Q5VWT5 728 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 CBWD1Q9BRT8 395 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 ANKEF1Q9NU02 776 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 A0A1W2PQC6 194 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 SUPT20HL2P0C7V6 817 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 XPAP23025 273 aaPredicted RBP14.63□□□□□ -0.07
SMC6-201ENST00000351948 ORC1Q13415 861 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 ARL13BQ3SXY8 428 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 C15orf52Q6ZUT6 534 aaKnown RBP14.63□□□□□ -0.07
SMC6-201ENST00000351948 CBWD2Q8IUF1 395 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 ATP2A3Q93084 1043 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 SCYL1Q96KG9 808 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 PARD6BQ9BYG5 372 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 TBX20Q9UMR3 447 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 PRG3Q9Y2Y8 225 aaPredicted RBP14.63□□□□□ -0.07
SMC6-201ENST00000351948 SNX24Q9Y343 169 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 ESYT3A0FGR9 886 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 TRPA1O75762 1119 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms