RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PMLP29590 882 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 HMGCS2P54868 508 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 PPM1NQ8N819 430 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 ENGASEQ8NFI3 743 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 OTUD5Q96G74 571 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 KLHL11Q9NVR0 708 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 SDC4P31431 198 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 NCAPHQ15003 741 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 SLC35G2Q8TBE7 412 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 MAP3K7O43318 606 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 HUS1O60921 280 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 KCNJ6P48051 423 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 KRT17Q04695 432 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 FBXO33Q7Z6M2 555 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 TTC25Q96NG3 672 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 CLGNO14967 610 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 TRPA1O75762 1119 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 MYBL1P10243 752 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 UCHL3P15374 230 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 GUCY1A3Q02108 690 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 DCTN4Q9UJW0 460 aa17.04■□□□□ 0.32
PTPN11-201ENST00000351677 INO80Q9ULG1 1556 aaPredicted RBP17.04■□□□□ 0.32
PTPN11-201ENST00000351677 SLC16A3O15427 465 aaKnown RBP17.03■□□□□ 0.32
PTPN11-201ENST00000351677 IZUMO3Q5VZ72 239 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 TRIM67Q6ZTA4 783 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 C2orf40Q9H1Z8 148 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 PFASO15067 1338 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 PDS5AQ29RF7 1337 aaKnown RBP17.03■□□□□ 0.32
PTPN11-201ENST00000351677 H0Y3Z8 333 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 TTI1O43156 1089 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 RTN2O75298 545 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 SPAG7O75391 227 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 SCP2P22307 547 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 EPHB1P54762 984 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ANKRD20A4Q4UJ75 823 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ZC2HC1CQ53FD0 456 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ANKRD20A8PQ5CZ79 823 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ANKRD20A2Q5SQ80 823 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 TMTC4Q5T4D3 741 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 FAM102AQ5T9C2 384 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ANKRD20A1Q5TYW2 823 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 APEX2Q9UBZ4 518 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 TFR2Q9UP52 801 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 GALCP54803 685 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ENOSF1Q7L5Y1 443 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 BEST2Q8NFU1 509 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 KAZALD1Q96I82 304 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 VPS11Q9H270 941 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 FHOD1Q9Y613 1164 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 MX2P20592 715 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 KLRK1P26718 216 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 TTLL4Q14679 1199 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 KLHL38Q2WGJ6 581 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 C1orf228Q6PIY5 440 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 JPH1Q9HDC5 661 aaPredicted RBP17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ARHGEF37A1IGU5 675 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 KRT38O76015 456 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 ADORA2BP29275 332 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 MORC4Q8TE76 937 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 TGS1Q96RS0 853 aaKnown RBP17.03■□□□□ 0.32
PTPN11-201ENST00000351677 MID2Q9UJV3 735 aa17.03■□□□□ 0.32
PTPN11-201ENST00000351677 BNIP3LO60238 219 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 FMO5P49326 533 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 MMP19Q99542 508 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 ABCF3Q9NUQ8 709 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 PIK3C2BO00750 1634 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 GNGT2O14610 69 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 KRT7P08729 469 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 SLC9A1P19634 815 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 TRIM51Q9BSJ1 452 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 STK33Q9BYT3 514 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 TRIM4Q9C037 500 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 DIP2CQ9Y2E4 1556 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 CEP170BQ9Y4F5 1589 aaPredicted RBP17.02■□□□□ 0.32
PTPN11-201ENST00000351677 PPP1R3GB7ZBB8 358 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 GYG2O15488 501 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 ACOT2P49753 483 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 TAF1BQ53T94 588 aaPredicted RBP17.02■□□□□ 0.32
PTPN11-201ENST00000351677 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 PARVAQ9NVD7 372 aa17.02■□□□□ 0.32
PTPN11-201ENST00000351677 PIK3R2O00459 728 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 STRIP1Q5VSL9 837 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 CPA5Q8WXQ8 436 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 CYP26B1Q9NR63 512 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 PRR12Q9ULL5 1215 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 DHX34Q14147 1143 aaKnown RBP17.02■□□□□ 0.31
PTPN11-201ENST00000351677 KLC3Q6P597 504 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 WDR75Q8IWA0 830 aaKnown RBP17.02■□□□□ 0.31
PTPN11-201ENST00000351677 RNF149Q8NC42 400 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 TMEM143Q96AN5 459 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 ZFP69BQ9UJL9 534 aa17.02■□□□□ 0.31
PTPN11-201ENST00000351677 NR1H3Q13133 447 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 DUOXA2Q1HG44 320 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 APOBEC3FQ8IUX4 373 aaKnown RBP17.01■□□□□ 0.31
PTPN11-201ENST00000351677 SH2D3CQ8N5H7 860 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 ANGPTL2Q9UKU9 493 aa17.01■□□□□ 0.31
PTPN11-201ENST00000351677 SPECC1L-ADORA2AF8WAN1 911 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms